Gene : Phvul.002G117100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24055:SF138 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  1173
Name:  ? Phvul.002G117100 Secondary Identifier:  ? PAC:37177839
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G117100 0.5kb upstream 0.5kb upstream 4416 true Chr02: 25021285-25025700 Phaseolus vulgaris
Phvul.002G117100 0.5kb upstream 0.5kb upstream 500 false Chr02: 25025201-25025700 Phaseolus vulgaris
Phvul.002G117100 0.5kb downstream 0.5kb downstream 4416 true Chr02: 25020785-25025200 Phaseolus vulgaris
Phvul.002G117100 0.5kb downstream 0.5kb downstream 500 false Chr02: 25020785-25021284 Phaseolus vulgaris
Phvul.002G117100 1.0kb upstream 1.0kb upstream 4916 true Chr02: 25021285-25026200 Phaseolus vulgaris
Phvul.002G117100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25025201-25026200 Phaseolus vulgaris
Phvul.002G117100 1.0kb downstream 1.0kb downstream 4916 true Chr02: 25020285-25025200 Phaseolus vulgaris
Phvul.002G117100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25020285-25021284 Phaseolus vulgaris
Phvul.002G117100 2.0kb upstream 2.0kb upstream 5916 true Chr02: 25021285-25027200 Phaseolus vulgaris
Phvul.002G117100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25025201-25027200 Phaseolus vulgaris
Phvul.002G117100 2.0kb downstream 2.0kb downstream 5916 true Chr02: 25019285-25025200 Phaseolus vulgaris
Phvul.002G117100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25019285-25021284 Phaseolus vulgaris
Phvul.002G117100 5.0kb upstream 5.0kb upstream 8916 true Chr02: 25021285-25030200 Phaseolus vulgaris
Phvul.002G117100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25025201-25030200 Phaseolus vulgaris
Phvul.002G117100 5.0kb downstream 5.0kb downstream 8916 true Chr02: 25016285-25025200 Phaseolus vulgaris
Phvul.002G117100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25016285-25021284 Phaseolus vulgaris
Phvul.002G117100 10.0kb upstream 10.0kb upstream 13916 true Chr02: 25021285-25035200 Phaseolus vulgaris
Phvul.002G117100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25025201-25035200 Phaseolus vulgaris
Phvul.002G117100 10.0kb downstream 10.0kb downstream 13916 true Chr02: 25011285-25025200 Phaseolus vulgaris
Phvul.002G117100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25011285-25021284 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296292 5265 Fabidae View MSA
124072935 5270 Rosid View MSA
123747510 5271 Pentapetalae View MSA
122793634 5272 Eudicot View MSA
122041644 5273 Angiosperm View MSA
121350096 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0497 0.0 44.7261    
cufflinks 9.01059 0.0 39.3457    
cufflinks 5.51279 0.0 23.1755   Low
cufflinks 14.4659 0.0 51.5678    
cufflinks 12.3618 0.0 50.0193    
cufflinks 10.0033 0.0 38.99    
cufflinks 16.6054 0.0 63.3253    
cufflinks 11.0229 0.0 44.5535    
cufflinks 15.9278 0.0 60.2269    
cufflinks 12.3029 0.0 49.3755    
cufflinks 20.1464 0.0 77.1393   High

0 Strain