Gene : Phvul.002G117600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13954 - IRE1-RELATED Genomic Order:  1178
Name:  ? Phvul.002G117600 Secondary Identifier:  ? PAC:37176198
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G117600 0.5kb upstream 0.5kb upstream 7154 true Chr02: 25068312-25075465 Phaseolus vulgaris
Phvul.002G117600 0.5kb upstream 0.5kb upstream 500 false Chr02: 25074966-25075465 Phaseolus vulgaris
Phvul.002G117600 0.5kb downstream 0.5kb downstream 7154 true Chr02: 25067812-25074965 Phaseolus vulgaris
Phvul.002G117600 0.5kb downstream 0.5kb downstream 500 false Chr02: 25067812-25068311 Phaseolus vulgaris
Phvul.002G117600 1.0kb upstream 1.0kb upstream 7654 true Chr02: 25068312-25075965 Phaseolus vulgaris
Phvul.002G117600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25074966-25075965 Phaseolus vulgaris
Phvul.002G117600 1.0kb downstream 1.0kb downstream 7654 true Chr02: 25067312-25074965 Phaseolus vulgaris
Phvul.002G117600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25067312-25068311 Phaseolus vulgaris
Phvul.002G117600 2.0kb upstream 2.0kb upstream 8654 true Chr02: 25068312-25076965 Phaseolus vulgaris
Phvul.002G117600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25074966-25076965 Phaseolus vulgaris
Phvul.002G117600 2.0kb downstream 2.0kb downstream 8654 true Chr02: 25066312-25074965 Phaseolus vulgaris
Phvul.002G117600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25066312-25068311 Phaseolus vulgaris
Phvul.002G117600 5.0kb upstream 5.0kb upstream 11654 true Chr02: 25068312-25079965 Phaseolus vulgaris
Phvul.002G117600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25074966-25079965 Phaseolus vulgaris
Phvul.002G117600 5.0kb downstream 5.0kb downstream 11654 true Chr02: 25063312-25074965 Phaseolus vulgaris
Phvul.002G117600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25063312-25068311 Phaseolus vulgaris
Phvul.002G117600 10.0kb upstream 10.0kb upstream 16654 true Chr02: 25068312-25084965 Phaseolus vulgaris
Phvul.002G117600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25074966-25084965 Phaseolus vulgaris
Phvul.002G117600 10.0kb downstream 10.0kb downstream 16654 true Chr02: 25058312-25074965 Phaseolus vulgaris
Phvul.002G117600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25058312-25068311 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313681 5265 Fabidae View MSA
124069221 5270 Rosid View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.52817 0.0 21.2986    
cufflinks 5.30428 0.0 16.4514    
cufflinks 4.82468 0.0 15.1504    
cufflinks 3.96143 0.0 13.0447   Low
cufflinks 5.65833 0.0 17.5869    
cufflinks 5.75659 0.0 17.6234    
cufflinks 8.87139 0.0 31.4222   High
cufflinks 7.57936 0.0 28.3587    
cufflinks 8.34301 0.0 24.2826    
cufflinks 10.9359 0.0 38.8051   High
cufflinks 5.47309 0.0 17.003    

0 Strain