Gene : Phvul.002G116550 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11760:SF21 - TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB Genomic Order:  1166
Name:  ? Phvul.002G116550 Secondary Identifier:  ? PAC:37176327
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G116550 0.5kb upstream 0.5kb upstream 3650 true Chr02: 24906395-24910044 Phaseolus vulgaris
Phvul.002G116550 0.5kb upstream 0.5kb upstream 500 false Chr02: 24909545-24910044 Phaseolus vulgaris
Phvul.002G116550 0.5kb downstream 0.5kb downstream 3650 true Chr02: 24905895-24909544 Phaseolus vulgaris
Phvul.002G116550 0.5kb downstream 0.5kb downstream 500 false Chr02: 24905895-24906394 Phaseolus vulgaris
Phvul.002G116550 1.0kb upstream 1.0kb upstream 4150 true Chr02: 24906395-24910544 Phaseolus vulgaris
Phvul.002G116550 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24909545-24910544 Phaseolus vulgaris
Phvul.002G116550 1.0kb downstream 1.0kb downstream 4150 true Chr02: 24905395-24909544 Phaseolus vulgaris
Phvul.002G116550 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24905395-24906394 Phaseolus vulgaris
Phvul.002G116550 2.0kb upstream 2.0kb upstream 5150 true Chr02: 24906395-24911544 Phaseolus vulgaris
Phvul.002G116550 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24909545-24911544 Phaseolus vulgaris
Phvul.002G116550 2.0kb downstream 2.0kb downstream 5150 true Chr02: 24904395-24909544 Phaseolus vulgaris
Phvul.002G116550 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24904395-24906394 Phaseolus vulgaris
Phvul.002G116550 5.0kb upstream 5.0kb upstream 8150 true Chr02: 24906395-24914544 Phaseolus vulgaris
Phvul.002G116550 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24909545-24914544 Phaseolus vulgaris
Phvul.002G116550 5.0kb downstream 5.0kb downstream 8150 true Chr02: 24901395-24909544 Phaseolus vulgaris
Phvul.002G116550 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24901395-24906394 Phaseolus vulgaris
Phvul.002G116550 10.0kb upstream 10.0kb upstream 13150 true Chr02: 24906395-24919544 Phaseolus vulgaris
Phvul.002G116550 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24909545-24919544 Phaseolus vulgaris
Phvul.002G116550 10.0kb downstream 10.0kb downstream 13150 true Chr02: 24896395-24909544 Phaseolus vulgaris
Phvul.002G116550 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24896395-24906394 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254052 5265 Fabidae View MSA
123996385 5270 Rosid View MSA
123747938 5271 Pentapetalae View MSA
122785661 5272 Eudicot View MSA
122042993 5273 Angiosperm View MSA
121344055 5274 Embryophyte View MSA
123425575 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0704387 0.0 0.396435 Low  
cufflinks 0.126831 0.0 0.62562 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.259257 0.0 1.14407 Low  
cufflinks 0.120931 0.0 0.571066 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0768855 0.0 0.434269 Low  
cufflinks 0.98491 0.0 7.38471   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0363341 0.0 0.267739 Low Low
cufflinks 0.21038 0.0 0.944746 Low  

0 Strain