Gene : Phvul.002G116700 P. vulgaris v2.1
Defline:  (1 of 13) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  1169
Name:  ? Phvul.002G116700 Secondary Identifier:  ? PAC:37175382
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G116700 0.5kb upstream 0.5kb upstream 6318 true Chr02: 24951043-24957360 Phaseolus vulgaris
Phvul.002G116700 0.5kb upstream 0.5kb upstream 500 false Chr02: 24951043-24951542 Phaseolus vulgaris
Phvul.002G116700 0.5kb downstream 0.5kb downstream 6318 true Chr02: 24951543-24957860 Phaseolus vulgaris
Phvul.002G116700 0.5kb downstream 0.5kb downstream 500 false Chr02: 24957361-24957860 Phaseolus vulgaris
Phvul.002G116700 1.0kb upstream 1.0kb upstream 6818 true Chr02: 24950543-24957360 Phaseolus vulgaris
Phvul.002G116700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24950543-24951542 Phaseolus vulgaris
Phvul.002G116700 1.0kb downstream 1.0kb downstream 6818 true Chr02: 24951543-24958360 Phaseolus vulgaris
Phvul.002G116700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24957361-24958360 Phaseolus vulgaris
Phvul.002G116700 2.0kb upstream 2.0kb upstream 7818 true Chr02: 24949543-24957360 Phaseolus vulgaris
Phvul.002G116700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24949543-24951542 Phaseolus vulgaris
Phvul.002G116700 2.0kb downstream 2.0kb downstream 7818 true Chr02: 24951543-24959360 Phaseolus vulgaris
Phvul.002G116700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24957361-24959360 Phaseolus vulgaris
Phvul.002G116700 5.0kb upstream 5.0kb upstream 10818 true Chr02: 24946543-24957360 Phaseolus vulgaris
Phvul.002G116700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24946543-24951542 Phaseolus vulgaris
Phvul.002G116700 5.0kb downstream 5.0kb downstream 10818 true Chr02: 24951543-24962360 Phaseolus vulgaris
Phvul.002G116700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24957361-24962360 Phaseolus vulgaris
Phvul.002G116700 10.0kb upstream 10.0kb upstream 15818 true Chr02: 24941543-24957360 Phaseolus vulgaris
Phvul.002G116700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24941543-24951542 Phaseolus vulgaris
Phvul.002G116700 10.0kb downstream 10.0kb downstream 15818 true Chr02: 24951543-24967360 Phaseolus vulgaris
Phvul.002G116700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24957361-24967360 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307727 5265 Fabidae View MSA
124065017 5270 Rosid View MSA
123737435 5271 Pentapetalae View MSA
122794026 5272 Eudicot View MSA
122043735 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.45385 0.0 7.70588   Low
cufflinks 3.34388 0.0 12.8322    
cufflinks 4.33633 0.0 15.8116    
cufflinks 2.30784 0.0 8.26728    
cufflinks 2.65796 0.0 9.27534    
cufflinks 6.90324 0.0 22.7523   High
cufflinks 3.85658 0.0 17.378    
cufflinks 3.19581 0.0 13.5485    
cufflinks 3.22601 0.0 13.6659    
cufflinks 8.48574 0.0 31.3503   High
cufflinks 3.02537 0.0 13.2591    

0 Strain