Gene : Phvul.002G117900 P. vulgaris v2.1
Defline:  (1 of 5) PTHR31942:SF18 - MLO-LIKE PROTEIN 10-RELATED Genomic Order:  1181
Name:  ? Phvul.002G117900 Secondary Identifier:  ? PAC:37176608
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G117900 0.5kb upstream 0.5kb upstream 7654 true Chr02: 25129738-25137391 Phaseolus vulgaris
Phvul.002G117900 0.5kb upstream 0.5kb upstream 500 false Chr02: 25129738-25130237 Phaseolus vulgaris
Phvul.002G117900 0.5kb downstream 0.5kb downstream 7654 true Chr02: 25130238-25137891 Phaseolus vulgaris
Phvul.002G117900 0.5kb downstream 0.5kb downstream 500 false Chr02: 25137392-25137891 Phaseolus vulgaris
Phvul.002G117900 1.0kb upstream 1.0kb upstream 8154 true Chr02: 25129238-25137391 Phaseolus vulgaris
Phvul.002G117900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 25129238-25130237 Phaseolus vulgaris
Phvul.002G117900 1.0kb downstream 1.0kb downstream 8154 true Chr02: 25130238-25138391 Phaseolus vulgaris
Phvul.002G117900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 25137392-25138391 Phaseolus vulgaris
Phvul.002G117900 2.0kb upstream 2.0kb upstream 9154 true Chr02: 25128238-25137391 Phaseolus vulgaris
Phvul.002G117900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 25128238-25130237 Phaseolus vulgaris
Phvul.002G117900 2.0kb downstream 2.0kb downstream 9154 true Chr02: 25130238-25139391 Phaseolus vulgaris
Phvul.002G117900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 25137392-25139391 Phaseolus vulgaris
Phvul.002G117900 5.0kb upstream 5.0kb upstream 12154 true Chr02: 25125238-25137391 Phaseolus vulgaris
Phvul.002G117900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 25125238-25130237 Phaseolus vulgaris
Phvul.002G117900 5.0kb downstream 5.0kb downstream 12154 true Chr02: 25130238-25142391 Phaseolus vulgaris
Phvul.002G117900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 25137392-25142391 Phaseolus vulgaris
Phvul.002G117900 10.0kb upstream 10.0kb upstream 17154 true Chr02: 25120238-25137391 Phaseolus vulgaris
Phvul.002G117900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 25120238-25130237 Phaseolus vulgaris
Phvul.002G117900 10.0kb downstream 10.0kb downstream 17154 true Chr02: 25130238-25147391 Phaseolus vulgaris
Phvul.002G117900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 25137392-25147391 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297275 5265 Fabidae View MSA
124063446 5270 Rosid View MSA
123751261 5271 Pentapetalae View MSA
122792831 5272 Eudicot View MSA
122047859 5273 Angiosperm View MSA
121350481 5274 Embryophyte View MSA
123428182 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.51975 0.0 12.9007    
cufflinks 3.90765 0.0 11.3373    
cufflinks 3.02091 0.0 8.9931    
cufflinks 7.26665 0.0 19.9661   High
cufflinks 2.26561 0.0 7.03304    
cufflinks 3.00864 0.0 8.98624    
cufflinks 2.53532 0.0 7.72591    
cufflinks 1.5161 0.0 4.87742   Low
cufflinks 3.48421 0.0 10.2551    
cufflinks 8.75898 0.0 23.6101   High
cufflinks 2.92058 0.0 8.80015    

0 Strain