Gene : Phvul.002G240700 P. vulgaris v2.1
Defline:  (1 of 10) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  2374
Name:  ? Phvul.002G240700 Secondary Identifier:  ? PAC:37176474
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G240700 0.5kb upstream 0.5kb upstream 1253 true Chr02: 41270392-41271644 Phaseolus vulgaris
Phvul.002G240700 0.5kb upstream 0.5kb upstream 500 false Chr02: 41271145-41271644 Phaseolus vulgaris
Phvul.002G240700 0.5kb downstream 0.5kb downstream 1253 true Chr02: 41269892-41271144 Phaseolus vulgaris
Phvul.002G240700 0.5kb downstream 0.5kb downstream 500 false Chr02: 41269892-41270391 Phaseolus vulgaris
Phvul.002G240700 1.0kb upstream 1.0kb upstream 1753 true Chr02: 41270392-41272144 Phaseolus vulgaris
Phvul.002G240700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41271145-41272144 Phaseolus vulgaris
Phvul.002G240700 1.0kb downstream 1.0kb downstream 1753 true Chr02: 41269392-41271144 Phaseolus vulgaris
Phvul.002G240700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41269392-41270391 Phaseolus vulgaris
Phvul.002G240700 2.0kb upstream 2.0kb upstream 2753 true Chr02: 41270392-41273144 Phaseolus vulgaris
Phvul.002G240700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41271145-41273144 Phaseolus vulgaris
Phvul.002G240700 2.0kb downstream 2.0kb downstream 2753 true Chr02: 41268392-41271144 Phaseolus vulgaris
Phvul.002G240700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41268392-41270391 Phaseolus vulgaris
Phvul.002G240700 5.0kb upstream 5.0kb upstream 5753 true Chr02: 41270392-41276144 Phaseolus vulgaris
Phvul.002G240700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41271145-41276144 Phaseolus vulgaris
Phvul.002G240700 5.0kb downstream 5.0kb downstream 5753 true Chr02: 41265392-41271144 Phaseolus vulgaris
Phvul.002G240700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41265392-41270391 Phaseolus vulgaris
Phvul.002G240700 10.0kb upstream 10.0kb upstream 10753 true Chr02: 41270392-41281144 Phaseolus vulgaris
Phvul.002G240700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41271145-41281144 Phaseolus vulgaris
Phvul.002G240700 10.0kb downstream 10.0kb downstream 10753 true Chr02: 41260392-41271144 Phaseolus vulgaris
Phvul.002G240700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41260392-41270391 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309293 5265 Fabidae View MSA
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10756 0.0 7.45357    
cufflinks 1.66231 0.0 6.0084    
cufflinks 0.682093 0.0 2.64736   Low
cufflinks 1.58523 0.0 5.78653    
cufflinks 2.05411 0.0 7.35194    
cufflinks 2.0544 0.0 7.26319    
cufflinks 12.7323 0.0 36.601   High
cufflinks 8.24328 0.0 24.8117   High
cufflinks 0.71203 0.0 2.75551   Low
cufflinks 3.62611 0.0 12.1245    
cufflinks 2.32275 0.0 8.16312    

0 Strain