Gene : Phvul.002G240900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31282:SF9 - WRKY TRANSCRIPTION FACTOR 65-RELATED Genomic Order:  2376
Name:  ? Phvul.002G240900 Secondary Identifier:  ? PAC:37175707
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G240900 0.5kb upstream 0.5kb upstream 2421 true Chr02: 41310519-41312939 Phaseolus vulgaris
Phvul.002G240900 0.5kb upstream 0.5kb upstream 500 false Chr02: 41310519-41311018 Phaseolus vulgaris
Phvul.002G240900 0.5kb downstream 0.5kb downstream 2421 true Chr02: 41311019-41313439 Phaseolus vulgaris
Phvul.002G240900 0.5kb downstream 0.5kb downstream 500 false Chr02: 41312940-41313439 Phaseolus vulgaris
Phvul.002G240900 1.0kb upstream 1.0kb upstream 2921 true Chr02: 41310019-41312939 Phaseolus vulgaris
Phvul.002G240900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41310019-41311018 Phaseolus vulgaris
Phvul.002G240900 1.0kb downstream 1.0kb downstream 2921 true Chr02: 41311019-41313939 Phaseolus vulgaris
Phvul.002G240900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41312940-41313939 Phaseolus vulgaris
Phvul.002G240900 2.0kb upstream 2.0kb upstream 3921 true Chr02: 41309019-41312939 Phaseolus vulgaris
Phvul.002G240900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41309019-41311018 Phaseolus vulgaris
Phvul.002G240900 2.0kb downstream 2.0kb downstream 3921 true Chr02: 41311019-41314939 Phaseolus vulgaris
Phvul.002G240900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41312940-41314939 Phaseolus vulgaris
Phvul.002G240900 5.0kb upstream 5.0kb upstream 6921 true Chr02: 41306019-41312939 Phaseolus vulgaris
Phvul.002G240900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41306019-41311018 Phaseolus vulgaris
Phvul.002G240900 5.0kb downstream 5.0kb downstream 6921 true Chr02: 41311019-41317939 Phaseolus vulgaris
Phvul.002G240900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41312940-41317939 Phaseolus vulgaris
Phvul.002G240900 10.0kb upstream 10.0kb upstream 11921 true Chr02: 41301019-41312939 Phaseolus vulgaris
Phvul.002G240900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41301019-41311018 Phaseolus vulgaris
Phvul.002G240900 10.0kb downstream 10.0kb downstream 11921 true Chr02: 41311019-41322939 Phaseolus vulgaris
Phvul.002G240900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41312940-41322939 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304096 5265 Fabidae View MSA
124065972 5270 Rosid View MSA
123749796 5271 Pentapetalae View MSA
122796843 5272 Eudicot View MSA
122048778 5273 Angiosperm View MSA
121311107 5274 Embryophyte View MSA
123348451 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.03008 0.0 6.30156    
cufflinks 0.929375 0.0 3.16755    
cufflinks 1.25306 0.0 4.14848    
cufflinks 0.90162 0.0 3.07968    
cufflinks 5.12312 0.0 14.4119    
cufflinks 0.960961 0.0 3.25916    
cufflinks 28.8424 0.0 75.1035 High High
cufflinks 17.0338 0.0 44.0993   High
cufflinks 54.4404 0.0 147.691 High High
cufflinks 4.56272 0.0 13.0139    
cufflinks 1.51805 0.0 4.86592    

0 Strain