Gene : Phvul.002G242600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR27006:SF3 - LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RFK1-RELATED Genomic Order:  2394
Name:  ? Phvul.002G242600 Secondary Identifier:  ? PAC:37174733
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G242600 0.5kb upstream 0.5kb upstream 13783 true Chr02: 41453705-41467487 Phaseolus vulgaris
Phvul.002G242600 0.5kb upstream 0.5kb upstream 500 false Chr02: 41453705-41454204 Phaseolus vulgaris
Phvul.002G242600 0.5kb downstream 0.5kb downstream 13783 true Chr02: 41454205-41467987 Phaseolus vulgaris
Phvul.002G242600 0.5kb downstream 0.5kb downstream 500 false Chr02: 41467488-41467987 Phaseolus vulgaris
Phvul.002G242600 1.0kb upstream 1.0kb upstream 14283 true Chr02: 41453205-41467487 Phaseolus vulgaris
Phvul.002G242600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41453205-41454204 Phaseolus vulgaris
Phvul.002G242600 1.0kb downstream 1.0kb downstream 14283 true Chr02: 41454205-41468487 Phaseolus vulgaris
Phvul.002G242600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41467488-41468487 Phaseolus vulgaris
Phvul.002G242600 2.0kb upstream 2.0kb upstream 15283 true Chr02: 41452205-41467487 Phaseolus vulgaris
Phvul.002G242600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41452205-41454204 Phaseolus vulgaris
Phvul.002G242600 2.0kb downstream 2.0kb downstream 15283 true Chr02: 41454205-41469487 Phaseolus vulgaris
Phvul.002G242600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41467488-41469487 Phaseolus vulgaris
Phvul.002G242600 5.0kb upstream 5.0kb upstream 18283 true Chr02: 41449205-41467487 Phaseolus vulgaris
Phvul.002G242600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41449205-41454204 Phaseolus vulgaris
Phvul.002G242600 5.0kb downstream 5.0kb downstream 18283 true Chr02: 41454205-41472487 Phaseolus vulgaris
Phvul.002G242600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41467488-41472487 Phaseolus vulgaris
Phvul.002G242600 10.0kb upstream 10.0kb upstream 23283 true Chr02: 41444205-41467487 Phaseolus vulgaris
Phvul.002G242600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41444205-41454204 Phaseolus vulgaris
Phvul.002G242600 10.0kb downstream 10.0kb downstream 23283 true Chr02: 41454205-41477487 Phaseolus vulgaris
Phvul.002G242600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41467488-41477487 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310887 5265 Fabidae View MSA
124071299 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.437199 0.0 1.91012    
cufflinks 2.01891 0.0 7.95012    
cufflinks 16.537 0.0 53.3707   High
cufflinks 0.583087 0.0 2.46486    
cufflinks 2.38551 0.0 8.99847    
cufflinks 9.30682 0.0 30.4059   High
cufflinks 0.157621 0.0 0.614771 Low  
cufflinks 0.0889787 0.0 0.361165 Low Low
cufflinks 0.0438412 0.0 0.192906 Low Low
cufflinks 9.25884 0.0 30.667   High
cufflinks 1.69554 0.0 7.06149    

0 Strain