Gene : Phvul.002G243100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR28141:SF1 - 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE Genomic Order:  2400
Name:  ? Phvul.002G243100 Secondary Identifier:  ? PAC:37176114
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G243100 0.5kb upstream 0.5kb upstream 1473 true Chr02: 41505615-41507087 Phaseolus vulgaris
Phvul.002G243100 0.5kb upstream 0.5kb upstream 500 false Chr02: 41505615-41506114 Phaseolus vulgaris
Phvul.002G243100 0.5kb downstream 0.5kb downstream 1473 true Chr02: 41506115-41507587 Phaseolus vulgaris
Phvul.002G243100 0.5kb downstream 0.5kb downstream 500 false Chr02: 41507088-41507587 Phaseolus vulgaris
Phvul.002G243100 1.0kb upstream 1.0kb upstream 1973 true Chr02: 41505115-41507087 Phaseolus vulgaris
Phvul.002G243100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41505115-41506114 Phaseolus vulgaris
Phvul.002G243100 1.0kb downstream 1.0kb downstream 1973 true Chr02: 41506115-41508087 Phaseolus vulgaris
Phvul.002G243100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41507088-41508087 Phaseolus vulgaris
Phvul.002G243100 2.0kb upstream 2.0kb upstream 2973 true Chr02: 41504115-41507087 Phaseolus vulgaris
Phvul.002G243100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41504115-41506114 Phaseolus vulgaris
Phvul.002G243100 2.0kb downstream 2.0kb downstream 2973 true Chr02: 41506115-41509087 Phaseolus vulgaris
Phvul.002G243100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41507088-41509087 Phaseolus vulgaris
Phvul.002G243100 5.0kb upstream 5.0kb upstream 5973 true Chr02: 41501115-41507087 Phaseolus vulgaris
Phvul.002G243100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41501115-41506114 Phaseolus vulgaris
Phvul.002G243100 5.0kb downstream 5.0kb downstream 5973 true Chr02: 41506115-41512087 Phaseolus vulgaris
Phvul.002G243100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41507088-41512087 Phaseolus vulgaris
Phvul.002G243100 10.0kb upstream 10.0kb upstream 10973 true Chr02: 41496115-41507087 Phaseolus vulgaris
Phvul.002G243100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41496115-41506114 Phaseolus vulgaris
Phvul.002G243100 10.0kb downstream 10.0kb downstream 10973 true Chr02: 41506115-41517087 Phaseolus vulgaris
Phvul.002G243100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41507088-41517087 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302136 5265 Fabidae View MSA
124065513 5270 Rosid View MSA
123741302 5271 Pentapetalae View MSA
122793487 5272 Eudicot View MSA
122041561 5273 Angiosperm View MSA
123429145 5275 Viridiplantae View MSA
121349919 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.7003 0.0 76.2713    
cufflinks 31.1857 0.0 82.4924    
cufflinks 27.4993 0.0 73.6111    
cufflinks 40.4505 0.0 104.823 High  
cufflinks 34.9177 0.0 91.241 High  
cufflinks 22.9763 0.0 62.2303   Low
cufflinks 33.5605 0.0 87.9025 High  
cufflinks 33.7583 0.0 88.9693 High  
cufflinks 44.1432 0.0 114.463 High High
cufflinks 43.0157 0.0 111.888 High High
cufflinks 32.4478 0.0 85.1901    

0 Strain