Gene : Phvul.002G241300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31161:SF7 - F28N24.3 PROTEIN Genomic Order:  2381
Name:  ? Phvul.002G241300 Secondary Identifier:  ? PAC:37178535
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G241300 0.5kb upstream 0.5kb upstream 1889 true Chr02: 41354303-41356191 Phaseolus vulgaris
Phvul.002G241300 0.5kb upstream 0.5kb upstream 500 false Chr02: 41355692-41356191 Phaseolus vulgaris
Phvul.002G241300 0.5kb downstream 0.5kb downstream 1889 true Chr02: 41353803-41355691 Phaseolus vulgaris
Phvul.002G241300 0.5kb downstream 0.5kb downstream 500 false Chr02: 41353803-41354302 Phaseolus vulgaris
Phvul.002G241300 1.0kb upstream 1.0kb upstream 2389 true Chr02: 41354303-41356691 Phaseolus vulgaris
Phvul.002G241300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41355692-41356691 Phaseolus vulgaris
Phvul.002G241300 1.0kb downstream 1.0kb downstream 2389 true Chr02: 41353303-41355691 Phaseolus vulgaris
Phvul.002G241300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41353303-41354302 Phaseolus vulgaris
Phvul.002G241300 2.0kb upstream 2.0kb upstream 3389 true Chr02: 41354303-41357691 Phaseolus vulgaris
Phvul.002G241300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41355692-41357691 Phaseolus vulgaris
Phvul.002G241300 2.0kb downstream 2.0kb downstream 3389 true Chr02: 41352303-41355691 Phaseolus vulgaris
Phvul.002G241300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41352303-41354302 Phaseolus vulgaris
Phvul.002G241300 5.0kb upstream 5.0kb upstream 6389 true Chr02: 41354303-41360691 Phaseolus vulgaris
Phvul.002G241300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41355692-41360691 Phaseolus vulgaris
Phvul.002G241300 5.0kb downstream 5.0kb downstream 6389 true Chr02: 41349303-41355691 Phaseolus vulgaris
Phvul.002G241300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41349303-41354302 Phaseolus vulgaris
Phvul.002G241300 10.0kb upstream 10.0kb upstream 11389 true Chr02: 41354303-41365691 Phaseolus vulgaris
Phvul.002G241300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41355692-41365691 Phaseolus vulgaris
Phvul.002G241300 10.0kb downstream 10.0kb downstream 11389 true Chr02: 41344303-41355691 Phaseolus vulgaris
Phvul.002G241300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41344303-41354302 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
122308887 5265 Fabidae View MSA
124063143 5270 Rosid View MSA
123743668 5271 Pentapetalae View MSA
122791275 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.887151 0.0 3.20348    
cufflinks 2.72655 0.0 8.70549    
cufflinks 0.515678 0.0 1.95163 Low  
cufflinks 0.412452 0.0 1.57951 Low  
cufflinks 2.86239 0.0 9.11064    
cufflinks 1.97609 0.0 6.55596    
cufflinks 2.28933 0.0 7.40632    
cufflinks 0.596276 0.0 2.22108    
cufflinks 1.73873 0.0 5.80211    
cufflinks 0.125452 0.0 0.531848 Low Low
cufflinks 2.87982 0.0 9.13368    

0 Strain