Gene : Phvul.002G243800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11081:SF8 - EXONUCLEASE 1 Genomic Order:  2407
Name:  ? Phvul.002G243800 Secondary Identifier:  ? PAC:37177402
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G243800 0.5kb upstream 0.5kb upstream 14330 true Chr02: 41588982-41603311 Phaseolus vulgaris
Phvul.002G243800 0.5kb upstream 0.5kb upstream 500 false Chr02: 41602812-41603311 Phaseolus vulgaris
Phvul.002G243800 0.5kb downstream 0.5kb downstream 14330 true Chr02: 41588482-41602811 Phaseolus vulgaris
Phvul.002G243800 0.5kb downstream 0.5kb downstream 500 false Chr02: 41588482-41588981 Phaseolus vulgaris
Phvul.002G243800 1.0kb upstream 1.0kb upstream 14830 true Chr02: 41588982-41603811 Phaseolus vulgaris
Phvul.002G243800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41602812-41603811 Phaseolus vulgaris
Phvul.002G243800 1.0kb downstream 1.0kb downstream 14830 true Chr02: 41587982-41602811 Phaseolus vulgaris
Phvul.002G243800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41587982-41588981 Phaseolus vulgaris
Phvul.002G243800 2.0kb upstream 2.0kb upstream 15830 true Chr02: 41588982-41604811 Phaseolus vulgaris
Phvul.002G243800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41602812-41604811 Phaseolus vulgaris
Phvul.002G243800 2.0kb downstream 2.0kb downstream 15830 true Chr02: 41586982-41602811 Phaseolus vulgaris
Phvul.002G243800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41586982-41588981 Phaseolus vulgaris
Phvul.002G243800 5.0kb upstream 5.0kb upstream 18830 true Chr02: 41588982-41607811 Phaseolus vulgaris
Phvul.002G243800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41602812-41607811 Phaseolus vulgaris
Phvul.002G243800 5.0kb downstream 5.0kb downstream 18830 true Chr02: 41583982-41602811 Phaseolus vulgaris
Phvul.002G243800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41583982-41588981 Phaseolus vulgaris
Phvul.002G243800 10.0kb upstream 10.0kb upstream 23830 true Chr02: 41588982-41612811 Phaseolus vulgaris
Phvul.002G243800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41602812-41612811 Phaseolus vulgaris
Phvul.002G243800 10.0kb downstream 10.0kb downstream 23830 true Chr02: 41578982-41602811 Phaseolus vulgaris
Phvul.002G243800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41578982-41588981 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041390 5273 Angiosperm View MSA
122310123 5265 Fabidae View MSA
124068271 5270 Rosid View MSA
123736616 5271 Pentapetalae View MSA
122790970 5272 Eudicot View MSA
121347446 5274 Embryophyte View MSA
123380554 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.280949 0.0 1.85558 Low Low
cufflinks 0.760733 0.0 3.83621    
cufflinks 1.11772 0.0 5.01791    
cufflinks 0.290023 0.0 1.33701 Low Low
cufflinks 0.815041 0.0 4.22572    
cufflinks 0.948646 0.0 4.47199    
cufflinks 2.12692 0.0 8.20423   High
cufflinks 2.24501 0.0 8.30829   High
cufflinks 1.56012 0.0 6.48633    
cufflinks 0.456966 0.0 2.63301    
cufflinks 0.495708 0.0 2.83 Low  

0 Strain