Gene : Phvul.002G244400 P. vulgaris v2.1
Defline:  (1 of 2) PF13233 - Complex1_LYR-like (Complex1_LYR_2) Genomic Order:  2413
Name:  ? Phvul.002G244400 Secondary Identifier:  ? PAC:37176859
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G244400 0.5kb upstream 0.5kb upstream 2832 true Chr02: 41636977-41639808 Phaseolus vulgaris
Phvul.002G244400 0.5kb upstream 0.5kb upstream 500 false Chr02: 41639309-41639808 Phaseolus vulgaris
Phvul.002G244400 0.5kb downstream 0.5kb downstream 2832 true Chr02: 41636477-41639308 Phaseolus vulgaris
Phvul.002G244400 0.5kb downstream 0.5kb downstream 500 false Chr02: 41636477-41636976 Phaseolus vulgaris
Phvul.002G244400 1.0kb upstream 1.0kb upstream 3332 true Chr02: 41636977-41640308 Phaseolus vulgaris
Phvul.002G244400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41639309-41640308 Phaseolus vulgaris
Phvul.002G244400 1.0kb downstream 1.0kb downstream 3332 true Chr02: 41635977-41639308 Phaseolus vulgaris
Phvul.002G244400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41635977-41636976 Phaseolus vulgaris
Phvul.002G244400 2.0kb upstream 2.0kb upstream 4332 true Chr02: 41636977-41641308 Phaseolus vulgaris
Phvul.002G244400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41639309-41641308 Phaseolus vulgaris
Phvul.002G244400 2.0kb downstream 2.0kb downstream 4332 true Chr02: 41634977-41639308 Phaseolus vulgaris
Phvul.002G244400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41634977-41636976 Phaseolus vulgaris
Phvul.002G244400 5.0kb upstream 5.0kb upstream 7332 true Chr02: 41636977-41644308 Phaseolus vulgaris
Phvul.002G244400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41639309-41644308 Phaseolus vulgaris
Phvul.002G244400 5.0kb downstream 5.0kb downstream 7332 true Chr02: 41631977-41639308 Phaseolus vulgaris
Phvul.002G244400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41631977-41636976 Phaseolus vulgaris
Phvul.002G244400 10.0kb upstream 10.0kb upstream 12332 true Chr02: 41636977-41649308 Phaseolus vulgaris
Phvul.002G244400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41639309-41649308 Phaseolus vulgaris
Phvul.002G244400 10.0kb downstream 10.0kb downstream 12332 true Chr02: 41626977-41639308 Phaseolus vulgaris
Phvul.002G244400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41626977-41636976 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305454 5265 Fabidae View MSA
124063359 5270 Rosid View MSA
123753617 5271 Pentapetalae View MSA
122788417 5272 Eudicot View MSA
122042390 5273 Angiosperm View MSA
121351633 5274 Embryophyte View MSA
123426034 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.76028 0.0 24.1098   High
cufflinks 3.9185 0.0 13.1515    
cufflinks 3.19782 0.0 10.9112    
cufflinks 10.0342 0.0 30.4766   High
cufflinks 3.42756 0.0 11.8017    
cufflinks 2.94418 0.0 10.1946    
cufflinks 3.76319 0.0 12.6921    
cufflinks 5.25116 0.0 16.8934    
cufflinks 3.06622 0.0 10.6102    
cufflinks 2.61605 0.0 9.19486    
cufflinks 2.74039 0.0 9.63087    

0 Strain