Gene : Phvul.002G246000 P. vulgaris v2.1
Defline:  (1 of 17) PF03004 - Plant transposase (Ptta/En/Spm family) (Transposase_24) Genomic Order:  2432
Name:  ? Phvul.002G246000 Secondary Identifier:  ? PAC:37176425
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G246000 0.5kb upstream 0.5kb upstream 5554 true Chr02: 41781028-41786581 Phaseolus vulgaris
Phvul.002G246000 0.5kb upstream 0.5kb upstream 500 false Chr02: 41786082-41786581 Phaseolus vulgaris
Phvul.002G246000 0.5kb downstream 0.5kb downstream 5554 true Chr02: 41780528-41786081 Phaseolus vulgaris
Phvul.002G246000 0.5kb downstream 0.5kb downstream 500 false Chr02: 41780528-41781027 Phaseolus vulgaris
Phvul.002G246000 1.0kb upstream 1.0kb upstream 6054 true Chr02: 41781028-41787081 Phaseolus vulgaris
Phvul.002G246000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41786082-41787081 Phaseolus vulgaris
Phvul.002G246000 1.0kb downstream 1.0kb downstream 6054 true Chr02: 41780028-41786081 Phaseolus vulgaris
Phvul.002G246000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41780028-41781027 Phaseolus vulgaris
Phvul.002G246000 2.0kb upstream 2.0kb upstream 7054 true Chr02: 41781028-41788081 Phaseolus vulgaris
Phvul.002G246000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41786082-41788081 Phaseolus vulgaris
Phvul.002G246000 2.0kb downstream 2.0kb downstream 7054 true Chr02: 41779028-41786081 Phaseolus vulgaris
Phvul.002G246000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41779028-41781027 Phaseolus vulgaris
Phvul.002G246000 5.0kb upstream 5.0kb upstream 10054 true Chr02: 41781028-41791081 Phaseolus vulgaris
Phvul.002G246000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41786082-41791081 Phaseolus vulgaris
Phvul.002G246000 5.0kb downstream 5.0kb downstream 10054 true Chr02: 41776028-41786081 Phaseolus vulgaris
Phvul.002G246000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41776028-41781027 Phaseolus vulgaris
Phvul.002G246000 10.0kb upstream 10.0kb upstream 15054 true Chr02: 41781028-41796081 Phaseolus vulgaris
Phvul.002G246000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41786082-41796081 Phaseolus vulgaris
Phvul.002G246000 10.0kb downstream 10.0kb downstream 15054 true Chr02: 41771028-41786081 Phaseolus vulgaris
Phvul.002G246000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41771028-41781027 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254234 5265 Fabidae View MSA
123996485 5270 Rosid View MSA
123753147 5271 Pentapetalae View MSA
122797842 5272 Eudicot View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017416 0.0 0.0863136 Low  
cufflinks 0.0160938 0.0 0.0803827 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0267738 0.0 0.125681 Low  
cufflinks 0.0981964 0.0 0.407303 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0718041 0.0 0.309024 Low  

0 Strain