Gene : Phvul.002G245500 P. vulgaris v2.1
Defline:  (1 of 4) PTHR12758:SF20 - PEPTIDASE-C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  2427
Name:  ? Phvul.002G245500 Secondary Identifier:  ? PAC:37177458
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G245500 0.5kb upstream 0.5kb upstream 10097 true Chr02: 41741075-41751171 Phaseolus vulgaris
Phvul.002G245500 0.5kb upstream 0.5kb upstream 500 false Chr02: 41741075-41741574 Phaseolus vulgaris
Phvul.002G245500 0.5kb downstream 0.5kb downstream 10097 true Chr02: 41741575-41751671 Phaseolus vulgaris
Phvul.002G245500 0.5kb downstream 0.5kb downstream 500 false Chr02: 41751172-41751671 Phaseolus vulgaris
Phvul.002G245500 1.0kb upstream 1.0kb upstream 10597 true Chr02: 41740575-41751171 Phaseolus vulgaris
Phvul.002G245500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41740575-41741574 Phaseolus vulgaris
Phvul.002G245500 1.0kb downstream 1.0kb downstream 10597 true Chr02: 41741575-41752171 Phaseolus vulgaris
Phvul.002G245500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41751172-41752171 Phaseolus vulgaris
Phvul.002G245500 2.0kb upstream 2.0kb upstream 11597 true Chr02: 41739575-41751171 Phaseolus vulgaris
Phvul.002G245500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41739575-41741574 Phaseolus vulgaris
Phvul.002G245500 2.0kb downstream 2.0kb downstream 11597 true Chr02: 41741575-41753171 Phaseolus vulgaris
Phvul.002G245500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41751172-41753171 Phaseolus vulgaris
Phvul.002G245500 5.0kb upstream 5.0kb upstream 14597 true Chr02: 41736575-41751171 Phaseolus vulgaris
Phvul.002G245500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41736575-41741574 Phaseolus vulgaris
Phvul.002G245500 5.0kb downstream 5.0kb downstream 14597 true Chr02: 41741575-41756171 Phaseolus vulgaris
Phvul.002G245500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41751172-41756171 Phaseolus vulgaris
Phvul.002G245500 10.0kb upstream 10.0kb upstream 19597 true Chr02: 41731575-41751171 Phaseolus vulgaris
Phvul.002G245500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41731575-41741574 Phaseolus vulgaris
Phvul.002G245500 10.0kb downstream 10.0kb downstream 19597 true Chr02: 41741575-41761171 Phaseolus vulgaris
Phvul.002G245500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41751172-41761171 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300528 5265 Fabidae View MSA
124065428 5270 Rosid View MSA
123746895 5271 Pentapetalae View MSA
122790736 5272 Eudicot View MSA
122047754 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.9585 0.0 103.439 High  
cufflinks 46.9605 0.0 130.785 High  
cufflinks 34.5527 0.0 93.3665    
cufflinks 41.9689 0.0 115.357 High  
cufflinks 56.4238 0.0 159.826 High High
cufflinks 39.3593 0.0 107.685 High  
cufflinks 35.2203 0.0 95.7612 High  
cufflinks 27.5047 0.0 73.2518   Low
cufflinks 48.3513 0.0 135.698 High  
cufflinks 53.892 0.0 152.456 High High
cufflinks 46.9326 0.0 130.446 High  

0 Strain