Gene : Phvul.002G245800 P. vulgaris v2.1
Defline:  (1 of 1) K09493 - T-complex protein 1 subunit alpha (CCT1, TCP1) Genomic Order:  2430
Name:  ? Phvul.002G245800 Secondary Identifier:  ? PAC:37174721
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G245800 0.5kb upstream 0.5kb upstream 10410 true Chr02: 41759639-41770048 Phaseolus vulgaris
Phvul.002G245800 0.5kb upstream 0.5kb upstream 500 false Chr02: 41769549-41770048 Phaseolus vulgaris
Phvul.002G245800 0.5kb downstream 0.5kb downstream 10410 true Chr02: 41759139-41769548 Phaseolus vulgaris
Phvul.002G245800 0.5kb downstream 0.5kb downstream 500 false Chr02: 41759139-41759638 Phaseolus vulgaris
Phvul.002G245800 1.0kb upstream 1.0kb upstream 10910 true Chr02: 41759639-41770548 Phaseolus vulgaris
Phvul.002G245800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41769549-41770548 Phaseolus vulgaris
Phvul.002G245800 1.0kb downstream 1.0kb downstream 10910 true Chr02: 41758639-41769548 Phaseolus vulgaris
Phvul.002G245800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41758639-41759638 Phaseolus vulgaris
Phvul.002G245800 2.0kb upstream 2.0kb upstream 11910 true Chr02: 41759639-41771548 Phaseolus vulgaris
Phvul.002G245800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41769549-41771548 Phaseolus vulgaris
Phvul.002G245800 2.0kb downstream 2.0kb downstream 11910 true Chr02: 41757639-41769548 Phaseolus vulgaris
Phvul.002G245800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41757639-41759638 Phaseolus vulgaris
Phvul.002G245800 5.0kb upstream 5.0kb upstream 14910 true Chr02: 41759639-41774548 Phaseolus vulgaris
Phvul.002G245800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41769549-41774548 Phaseolus vulgaris
Phvul.002G245800 5.0kb downstream 5.0kb downstream 14910 true Chr02: 41754639-41769548 Phaseolus vulgaris
Phvul.002G245800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41754639-41759638 Phaseolus vulgaris
Phvul.002G245800 10.0kb upstream 10.0kb upstream 19910 true Chr02: 41759639-41779548 Phaseolus vulgaris
Phvul.002G245800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41769549-41779548 Phaseolus vulgaris
Phvul.002G245800 10.0kb downstream 10.0kb downstream 19910 true Chr02: 41749639-41769548 Phaseolus vulgaris
Phvul.002G245800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41749639-41759638 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308396 5265 Fabidae View MSA
124067300 5270 Rosid View MSA
123737840 5271 Pentapetalae View MSA
122792769 5272 Eudicot View MSA
122046551 5273 Angiosperm View MSA
121345633 5274 Embryophyte View MSA
123423902 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.0862 0.0 92.3085 High  
cufflinks 67.8973 0.0 188.705 High High
cufflinks 35.2131 0.0 92.6371    
cufflinks 51.5611 0.0 138.659 High  
cufflinks 46.6191 0.0 124.532 High  
cufflinks 31.4306 0.0 82.1876   Low
cufflinks 49.81 0.0 134.332 High  
cufflinks 49.8181 0.0 134.594 High  
cufflinks 71.28 0.0 198.819 High High
cufflinks 33.8829 0.0 88.8749   Low
cufflinks 48.6848 0.0 130.694 High  

0 Strain