Gene : Phvul.002G232400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31621:SF0 - DUF679 DOMAIN MEMBRANE PROTEIN 7 Genomic Order:  2305
Name:  ? Phvul.002G232400 Secondary Identifier:  ? PAC:37178454
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G232400 0.5kb upstream 0.5kb upstream 1145 true Chr02: 40506037-40507181 Phaseolus vulgaris
Phvul.002G232400 0.5kb upstream 0.5kb upstream 500 false Chr02: 40506682-40507181 Phaseolus vulgaris
Phvul.002G232400 0.5kb downstream 0.5kb downstream 1145 true Chr02: 40505537-40506681 Phaseolus vulgaris
Phvul.002G232400 0.5kb downstream 0.5kb downstream 500 false Chr02: 40505537-40506036 Phaseolus vulgaris
Phvul.002G232400 1.0kb upstream 1.0kb upstream 1645 true Chr02: 40506037-40507681 Phaseolus vulgaris
Phvul.002G232400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40506682-40507681 Phaseolus vulgaris
Phvul.002G232400 1.0kb downstream 1.0kb downstream 1645 true Chr02: 40505037-40506681 Phaseolus vulgaris
Phvul.002G232400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40505037-40506036 Phaseolus vulgaris
Phvul.002G232400 2.0kb upstream 2.0kb upstream 2645 true Chr02: 40506037-40508681 Phaseolus vulgaris
Phvul.002G232400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40506682-40508681 Phaseolus vulgaris
Phvul.002G232400 2.0kb downstream 2.0kb downstream 2645 true Chr02: 40504037-40506681 Phaseolus vulgaris
Phvul.002G232400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40504037-40506036 Phaseolus vulgaris
Phvul.002G232400 5.0kb upstream 5.0kb upstream 5645 true Chr02: 40506037-40511681 Phaseolus vulgaris
Phvul.002G232400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40506682-40511681 Phaseolus vulgaris
Phvul.002G232400 5.0kb downstream 5.0kb downstream 5645 true Chr02: 40501037-40506681 Phaseolus vulgaris
Phvul.002G232400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40501037-40506036 Phaseolus vulgaris
Phvul.002G232400 10.0kb upstream 10.0kb upstream 10645 true Chr02: 40506037-40516681 Phaseolus vulgaris
Phvul.002G232400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40506682-40516681 Phaseolus vulgaris
Phvul.002G232400 10.0kb downstream 10.0kb downstream 10645 true Chr02: 40496037-40506681 Phaseolus vulgaris
Phvul.002G232400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40496037-40506036 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314184 5265 Fabidae View MSA
124071441 5270 Rosid View MSA
123744074 5271 Pentapetalae View MSA
122789461 5272 Eudicot View MSA
122044570 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 114.717 0.0 296.532 High High
cufflinks 1.53487 0.0 5.81957    
cufflinks 1.90661 0.0 7.07325    
cufflinks 29.8785 0.0 82.9389   High
cufflinks 1.42462 0.0 5.45501    
cufflinks 0.316458 0.0 1.36549 Low Low
cufflinks 0.371617 0.0 1.58214 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.09208 0.0 7.73667    
cufflinks 8.48951 0.0 27.1662    
cufflinks 2.11194 0.0 7.82203    

0 Strain