Gene : Phvul.002G239100 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31314:SF10 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  2359
Name:  ? Phvul.002G239100 Secondary Identifier:  ? PAC:37177001
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G239100 0.5kb upstream 0.5kb upstream 8828 true Chr02: 41079182-41088009 Phaseolus vulgaris
Phvul.002G239100 0.5kb upstream 0.5kb upstream 500 false Chr02: 41079182-41079681 Phaseolus vulgaris
Phvul.002G239100 0.5kb downstream 0.5kb downstream 8828 true Chr02: 41079682-41088509 Phaseolus vulgaris
Phvul.002G239100 0.5kb downstream 0.5kb downstream 500 false Chr02: 41088010-41088509 Phaseolus vulgaris
Phvul.002G239100 1.0kb upstream 1.0kb upstream 9328 true Chr02: 41078682-41088009 Phaseolus vulgaris
Phvul.002G239100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41078682-41079681 Phaseolus vulgaris
Phvul.002G239100 1.0kb downstream 1.0kb downstream 9328 true Chr02: 41079682-41089009 Phaseolus vulgaris
Phvul.002G239100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41088010-41089009 Phaseolus vulgaris
Phvul.002G239100 2.0kb upstream 2.0kb upstream 10328 true Chr02: 41077682-41088009 Phaseolus vulgaris
Phvul.002G239100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41077682-41079681 Phaseolus vulgaris
Phvul.002G239100 2.0kb downstream 2.0kb downstream 10328 true Chr02: 41079682-41090009 Phaseolus vulgaris
Phvul.002G239100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41088010-41090009 Phaseolus vulgaris
Phvul.002G239100 5.0kb upstream 5.0kb upstream 13328 true Chr02: 41074682-41088009 Phaseolus vulgaris
Phvul.002G239100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41074682-41079681 Phaseolus vulgaris
Phvul.002G239100 5.0kb downstream 5.0kb downstream 13328 true Chr02: 41079682-41093009 Phaseolus vulgaris
Phvul.002G239100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41088010-41093009 Phaseolus vulgaris
Phvul.002G239100 10.0kb upstream 10.0kb upstream 18328 true Chr02: 41069682-41088009 Phaseolus vulgaris
Phvul.002G239100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41069682-41079681 Phaseolus vulgaris
Phvul.002G239100 10.0kb downstream 10.0kb downstream 18328 true Chr02: 41079682-41098009 Phaseolus vulgaris
Phvul.002G239100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41088010-41098009 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307090 5265 Fabidae View MSA
124071619 5270 Rosid View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.361077 0.0 1.65522 Low  
cufflinks 0.20168 0.0 0.79304 Low Low
cufflinks 0.678108 0.0 2.95339    
cufflinks 0.163411 0.0 0.657106 Low Low
cufflinks 0.402219 0.0 1.86553 Low  
cufflinks 3.30547 0.0 12.1347    
cufflinks 3.97773 0.0 16.3665   High
cufflinks 5.67521 0.0 18.2191   High
cufflinks 3.23109 0.0 11.8913    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.07039 0.0 4.28303    

0 Strain