Gene : Phvul.002G239300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12411:SF371 - CATHEPSIN O Genomic Order:  2361
Name:  ? Phvul.002G239300 Secondary Identifier:  ? PAC:37177549
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G239300 0.5kb upstream 0.5kb upstream 2426 true Chr02: 41104415-41106840 Phaseolus vulgaris
Phvul.002G239300 0.5kb upstream 0.5kb upstream 500 false Chr02: 41104415-41104914 Phaseolus vulgaris
Phvul.002G239300 0.5kb downstream 0.5kb downstream 2426 true Chr02: 41104915-41107340 Phaseolus vulgaris
Phvul.002G239300 0.5kb downstream 0.5kb downstream 500 false Chr02: 41106841-41107340 Phaseolus vulgaris
Phvul.002G239300 1.0kb upstream 1.0kb upstream 2926 true Chr02: 41103915-41106840 Phaseolus vulgaris
Phvul.002G239300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41103915-41104914 Phaseolus vulgaris
Phvul.002G239300 1.0kb downstream 1.0kb downstream 2926 true Chr02: 41104915-41107840 Phaseolus vulgaris
Phvul.002G239300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41106841-41107840 Phaseolus vulgaris
Phvul.002G239300 2.0kb upstream 2.0kb upstream 3926 true Chr02: 41102915-41106840 Phaseolus vulgaris
Phvul.002G239300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41102915-41104914 Phaseolus vulgaris
Phvul.002G239300 2.0kb downstream 2.0kb downstream 3926 true Chr02: 41104915-41108840 Phaseolus vulgaris
Phvul.002G239300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41106841-41108840 Phaseolus vulgaris
Phvul.002G239300 5.0kb upstream 5.0kb upstream 6926 true Chr02: 41099915-41106840 Phaseolus vulgaris
Phvul.002G239300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41099915-41104914 Phaseolus vulgaris
Phvul.002G239300 5.0kb downstream 5.0kb downstream 6926 true Chr02: 41104915-41111840 Phaseolus vulgaris
Phvul.002G239300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41106841-41111840 Phaseolus vulgaris
Phvul.002G239300 10.0kb upstream 10.0kb upstream 11926 true Chr02: 41094915-41106840 Phaseolus vulgaris
Phvul.002G239300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41094915-41104914 Phaseolus vulgaris
Phvul.002G239300 10.0kb downstream 10.0kb downstream 11926 true Chr02: 41104915-41116840 Phaseolus vulgaris
Phvul.002G239300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41106841-41116840 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780807 5273 Angiosperm View MSA
122296443 5265 Fabidae View MSA
124035647 5270 Rosid View MSA
123747945 5271 Pentapetalae View MSA
122772367 5272 Eudicot View MSA
121052407 5274 Embryophyte View MSA
123092456 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4508 0.0 28.021    
cufflinks 35.2915 0.0 91.6347 High  
cufflinks 0.778474 0.0 2.74876    
cufflinks 66.3758 0.0 177.357 High High
cufflinks 1.71208 0.0 5.57841    
cufflinks 10.2654 0.0 27.5571    
cufflinks 3.13634 0.0 9.42953    
cufflinks 20.5061 0.0 53.0883    
cufflinks 0.0663488 0.0 0.288149 Low Low
cufflinks 3.79691 0.0 11.2537    
cufflinks 14.7704 0.0 38.7816    

0 Strain