Gene : Phvul.002G226600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10992//PTHR10992:SF869 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2242
Name:  ? Phvul.002G226600 Secondary Identifier:  ? PAC:37174881
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G226600 0.5kb upstream 0.5kb upstream 2991 true Chr02: 39805528-39808518 Phaseolus vulgaris
Phvul.002G226600 0.5kb upstream 0.5kb upstream 500 false Chr02: 39808019-39808518 Phaseolus vulgaris
Phvul.002G226600 0.5kb downstream 0.5kb downstream 2991 true Chr02: 39805028-39808018 Phaseolus vulgaris
Phvul.002G226600 0.5kb downstream 0.5kb downstream 500 false Chr02: 39805028-39805527 Phaseolus vulgaris
Phvul.002G226600 1.0kb upstream 1.0kb upstream 3491 true Chr02: 39805528-39809018 Phaseolus vulgaris
Phvul.002G226600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39808019-39809018 Phaseolus vulgaris
Phvul.002G226600 1.0kb downstream 1.0kb downstream 3491 true Chr02: 39804528-39808018 Phaseolus vulgaris
Phvul.002G226600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39804528-39805527 Phaseolus vulgaris
Phvul.002G226600 2.0kb upstream 2.0kb upstream 4491 true Chr02: 39805528-39810018 Phaseolus vulgaris
Phvul.002G226600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39808019-39810018 Phaseolus vulgaris
Phvul.002G226600 2.0kb downstream 2.0kb downstream 4491 true Chr02: 39803528-39808018 Phaseolus vulgaris
Phvul.002G226600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39803528-39805527 Phaseolus vulgaris
Phvul.002G226600 5.0kb upstream 5.0kb upstream 7491 true Chr02: 39805528-39813018 Phaseolus vulgaris
Phvul.002G226600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39808019-39813018 Phaseolus vulgaris
Phvul.002G226600 5.0kb downstream 5.0kb downstream 7491 true Chr02: 39800528-39808018 Phaseolus vulgaris
Phvul.002G226600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39800528-39805527 Phaseolus vulgaris
Phvul.002G226600 10.0kb upstream 10.0kb upstream 12491 true Chr02: 39805528-39818018 Phaseolus vulgaris
Phvul.002G226600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39808019-39818018 Phaseolus vulgaris
Phvul.002G226600 10.0kb downstream 10.0kb downstream 12491 true Chr02: 39795528-39808018 Phaseolus vulgaris
Phvul.002G226600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39795528-39805527 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308365 5265 Fabidae View MSA
124069976 5270 Rosid View MSA
123753681 5271 Pentapetalae View MSA
122797567 5272 Eudicot View MSA
122048317 5273 Angiosperm View MSA
121350618 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.9655 0.0 14.8108    
cufflinks 13.0006 0.0 35.3972    
cufflinks 0.701 0.0 2.5853   Low
cufflinks 9.58419 0.0 26.8889    
cufflinks 3.84345 0.0 11.8805    
cufflinks 3.38088 0.0 10.5756    
cufflinks 5.71534 0.0 16.8188    
cufflinks 12.313 0.0 33.5617    
cufflinks 5.84186 0.0 17.2397    
cufflinks 16.7852 0.0 44.7948   High
cufflinks 7.41584 0.0 21.3077    

0 Strain