Gene : Phvul.002G224900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31719:SF9 - ATNAC2-RELATED Genomic Order:  2230
Name:  ? Phvul.002G224900 Secondary Identifier:  ? PAC:37178457
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G224900 0.5kb upstream 0.5kb upstream 2448 true Chr02: 39668002-39670449 Phaseolus vulgaris
Phvul.002G224900 0.5kb upstream 0.5kb upstream 500 false Chr02: 39669950-39670449 Phaseolus vulgaris
Phvul.002G224900 0.5kb downstream 0.5kb downstream 2448 true Chr02: 39667502-39669949 Phaseolus vulgaris
Phvul.002G224900 0.5kb downstream 0.5kb downstream 500 false Chr02: 39667502-39668001 Phaseolus vulgaris
Phvul.002G224900 1.0kb upstream 1.0kb upstream 2948 true Chr02: 39668002-39670949 Phaseolus vulgaris
Phvul.002G224900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39669950-39670949 Phaseolus vulgaris
Phvul.002G224900 1.0kb downstream 1.0kb downstream 2948 true Chr02: 39667002-39669949 Phaseolus vulgaris
Phvul.002G224900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39667002-39668001 Phaseolus vulgaris
Phvul.002G224900 2.0kb upstream 2.0kb upstream 3948 true Chr02: 39668002-39671949 Phaseolus vulgaris
Phvul.002G224900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39669950-39671949 Phaseolus vulgaris
Phvul.002G224900 2.0kb downstream 2.0kb downstream 3948 true Chr02: 39666002-39669949 Phaseolus vulgaris
Phvul.002G224900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39666002-39668001 Phaseolus vulgaris
Phvul.002G224900 5.0kb upstream 5.0kb upstream 6948 true Chr02: 39668002-39674949 Phaseolus vulgaris
Phvul.002G224900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39669950-39674949 Phaseolus vulgaris
Phvul.002G224900 5.0kb downstream 5.0kb downstream 6948 true Chr02: 39663002-39669949 Phaseolus vulgaris
Phvul.002G224900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39663002-39668001 Phaseolus vulgaris
Phvul.002G224900 10.0kb upstream 10.0kb upstream 11948 true Chr02: 39668002-39679949 Phaseolus vulgaris
Phvul.002G224900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39669950-39679949 Phaseolus vulgaris
Phvul.002G224900 10.0kb downstream 10.0kb downstream 11948 true Chr02: 39658002-39669949 Phaseolus vulgaris
Phvul.002G224900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39658002-39668001 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312418 5265 Fabidae View MSA
124065723 5270 Rosid View MSA
123745074 5271 Pentapetalae View MSA
122796583 5272 Eudicot View MSA
122049237 5273 Angiosperm View MSA
121349958 5274 Embryophyte View MSA
123381516 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3956 0.0 31.0755   High
cufflinks 1.27469 0.0 4.42042    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 26.8689 0.0 69.6281   High
cufflinks 1.59464 0.0 5.4022    
cufflinks 0.0660816 0.0 0.296573 Low Low
cufflinks 0.164675 0.0 0.67703 Low  
cufflinks 0.10348 0.0 0.443583 Low Low
cufflinks 0.149073 0.0 0.618331 Low  
cufflinks 0.47144 0.0 1.79149    
cufflinks 2.4127 0.0 7.79713    

0 Strain