Gene : Phvul.002G225500 P. vulgaris v2.1
Genomic Order:  2232 Name:  ? Phvul.002G225500
Secondary Identifier:  ? PAC:37175102
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G225500 0.5kb upstream 0.5kb upstream 4930 true Chr02: 39713174-39718103 Phaseolus vulgaris
Phvul.002G225500 0.5kb upstream 0.5kb upstream 500 false Chr02: 39713174-39713673 Phaseolus vulgaris
Phvul.002G225500 0.5kb downstream 0.5kb downstream 4930 true Chr02: 39713674-39718603 Phaseolus vulgaris
Phvul.002G225500 0.5kb downstream 0.5kb downstream 500 false Chr02: 39718104-39718603 Phaseolus vulgaris
Phvul.002G225500 1.0kb upstream 1.0kb upstream 5430 true Chr02: 39712674-39718103 Phaseolus vulgaris
Phvul.002G225500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39712674-39713673 Phaseolus vulgaris
Phvul.002G225500 1.0kb downstream 1.0kb downstream 5430 true Chr02: 39713674-39719103 Phaseolus vulgaris
Phvul.002G225500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39718104-39719103 Phaseolus vulgaris
Phvul.002G225500 2.0kb upstream 2.0kb upstream 6430 true Chr02: 39711674-39718103 Phaseolus vulgaris
Phvul.002G225500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39711674-39713673 Phaseolus vulgaris
Phvul.002G225500 2.0kb downstream 2.0kb downstream 6430 true Chr02: 39713674-39720103 Phaseolus vulgaris
Phvul.002G225500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39718104-39720103 Phaseolus vulgaris
Phvul.002G225500 5.0kb upstream 5.0kb upstream 9430 true Chr02: 39708674-39718103 Phaseolus vulgaris
Phvul.002G225500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39708674-39713673 Phaseolus vulgaris
Phvul.002G225500 5.0kb downstream 5.0kb downstream 9430 true Chr02: 39713674-39723103 Phaseolus vulgaris
Phvul.002G225500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39718104-39723103 Phaseolus vulgaris
Phvul.002G225500 10.0kb upstream 10.0kb upstream 14430 true Chr02: 39703674-39718103 Phaseolus vulgaris
Phvul.002G225500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39703674-39713673 Phaseolus vulgaris
Phvul.002G225500 10.0kb downstream 10.0kb downstream 14430 true Chr02: 39713674-39728103 Phaseolus vulgaris
Phvul.002G225500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39718104-39728103 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309174 5265 Fabidae View MSA
124069520 5270 Rosid View MSA
123747177 5271 Pentapetalae View MSA
122796256 5272 Eudicot View MSA
122048437 5273 Angiosperm View MSA
121310973 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.929499 0.0 3.08024   High
cufflinks 0.0115435 0.0 0.0576552 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.530902 0.0 1.87261 Low High
cufflinks 0.021821 0.0 0.102462 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0132258 0.0 0.0647735 Low  
cufflinks 0.0289097 0.0 0.130206 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00652956 0.0 0.0349259 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain