Gene : Phvul.002G225600 P. vulgaris v2.1
Defline:  (1 of 1) 1.14.18.1 - Tyrosinase / Tyrosine-dopa oxidase Genomic Order:  2233
Name:  ? Phvul.002G225600 Secondary Identifier:  ? PAC:37178514
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6481 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6752 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G225600 0.5kb upstream 0.5kb upstream 2285 true Chr02: 39726441-39728725 Phaseolus vulgaris
Phvul.002G225600 0.5kb upstream 0.5kb upstream 500 false Chr02: 39728226-39728725 Phaseolus vulgaris
Phvul.002G225600 0.5kb downstream 0.5kb downstream 2285 true Chr02: 39725941-39728225 Phaseolus vulgaris
Phvul.002G225600 0.5kb downstream 0.5kb downstream 500 false Chr02: 39725941-39726440 Phaseolus vulgaris
Phvul.002G225600 1.0kb upstream 1.0kb upstream 2785 true Chr02: 39726441-39729225 Phaseolus vulgaris
Phvul.002G225600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39728226-39729225 Phaseolus vulgaris
Phvul.002G225600 1.0kb downstream 1.0kb downstream 2785 true Chr02: 39725441-39728225 Phaseolus vulgaris
Phvul.002G225600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39725441-39726440 Phaseolus vulgaris
Phvul.002G225600 2.0kb upstream 2.0kb upstream 3785 true Chr02: 39726441-39730225 Phaseolus vulgaris
Phvul.002G225600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39728226-39730225 Phaseolus vulgaris
Phvul.002G225600 2.0kb downstream 2.0kb downstream 3785 true Chr02: 39724441-39728225 Phaseolus vulgaris
Phvul.002G225600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39724441-39726440 Phaseolus vulgaris
Phvul.002G225600 5.0kb upstream 5.0kb upstream 6785 true Chr02: 39726441-39733225 Phaseolus vulgaris
Phvul.002G225600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39728226-39733225 Phaseolus vulgaris
Phvul.002G225600 5.0kb downstream 5.0kb downstream 6785 true Chr02: 39721441-39728225 Phaseolus vulgaris
Phvul.002G225600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39721441-39726440 Phaseolus vulgaris
Phvul.002G225600 10.0kb upstream 10.0kb upstream 11785 true Chr02: 39726441-39738225 Phaseolus vulgaris
Phvul.002G225600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39728226-39738225 Phaseolus vulgaris
Phvul.002G225600 10.0kb downstream 10.0kb downstream 11785 true Chr02: 39716441-39728225 Phaseolus vulgaris
Phvul.002G225600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39716441-39726440 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027808 5273 Angiosperm View MSA
122253790 5265 Fabidae View MSA
123996239 5270 Rosid View MSA
123570750 5271 Pentapetalae View MSA
122605485 5272 Eudicot View MSA
121350975 5274 Embryophyte View MSA
123428097 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.31993 0.0 25.1745    
cufflinks 24.5815 0.0 63.5431    
cufflinks 58.3241 0.0 156.06 High  
cufflinks 3.08867 0.0 9.36856    
cufflinks 13.8865 0.0 36.6063    
cufflinks 103.242 0.0 291.821 High High
cufflinks 0.0406504 0.0 0.185081 Low Low
cufflinks 0.179494 0.0 0.715067 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0494266 0.0 0.22164 Low Low
cufflinks 21.3109 0.0 55.1991    

0 Strain