Gene : Phvul.002G226000 P. vulgaris v2.1
Defline:  (1 of 14) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  2235
Name:  ? Phvul.002G226000 Secondary Identifier:  ? PAC:37178607
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G226000 0.5kb upstream 0.5kb upstream 5204 true Chr02: 39751110-39756313 Phaseolus vulgaris
Phvul.002G226000 0.5kb upstream 0.5kb upstream 500 false Chr02: 39751110-39751609 Phaseolus vulgaris
Phvul.002G226000 0.5kb downstream 0.5kb downstream 5204 true Chr02: 39751610-39756813 Phaseolus vulgaris
Phvul.002G226000 0.5kb downstream 0.5kb downstream 500 false Chr02: 39756314-39756813 Phaseolus vulgaris
Phvul.002G226000 1.0kb upstream 1.0kb upstream 5704 true Chr02: 39750610-39756313 Phaseolus vulgaris
Phvul.002G226000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39750610-39751609 Phaseolus vulgaris
Phvul.002G226000 1.0kb downstream 1.0kb downstream 5704 true Chr02: 39751610-39757313 Phaseolus vulgaris
Phvul.002G226000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39756314-39757313 Phaseolus vulgaris
Phvul.002G226000 2.0kb upstream 2.0kb upstream 6704 true Chr02: 39749610-39756313 Phaseolus vulgaris
Phvul.002G226000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39749610-39751609 Phaseolus vulgaris
Phvul.002G226000 2.0kb downstream 2.0kb downstream 6704 true Chr02: 39751610-39758313 Phaseolus vulgaris
Phvul.002G226000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39756314-39758313 Phaseolus vulgaris
Phvul.002G226000 5.0kb upstream 5.0kb upstream 9704 true Chr02: 39746610-39756313 Phaseolus vulgaris
Phvul.002G226000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39746610-39751609 Phaseolus vulgaris
Phvul.002G226000 5.0kb downstream 5.0kb downstream 9704 true Chr02: 39751610-39761313 Phaseolus vulgaris
Phvul.002G226000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39756314-39761313 Phaseolus vulgaris
Phvul.002G226000 10.0kb upstream 10.0kb upstream 14704 true Chr02: 39741610-39756313 Phaseolus vulgaris
Phvul.002G226000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39741610-39751609 Phaseolus vulgaris
Phvul.002G226000 10.0kb downstream 10.0kb downstream 14704 true Chr02: 39751610-39766313 Phaseolus vulgaris
Phvul.002G226000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39756314-39766313 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026895 5273 Angiosperm View MSA
122308002 5265 Fabidae View MSA
124063310 5270 Rosid View MSA
123738532 5271 Pentapetalae View MSA
122795984 5272 Eudicot View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.2965 0.0 78.8637   High
cufflinks 5.60673 0.0 16.8799    
cufflinks 1.39448 0.0 4.90329   Low
cufflinks 10.4788 0.0 29.6847    
cufflinks 8.42454 0.0 24.3221    
cufflinks 1.21417 0.0 4.33451   Low
cufflinks 18.3256 0.0 49.1393    
cufflinks 54.7576 0.0 141.857 High High
cufflinks 12.6181 0.0 35.0097    
cufflinks 3.08987 0.0 9.97749    
cufflinks 7.66867 0.0 22.343    

0 Strain