Gene : Phvul.002G228500 P. vulgaris v2.1
Defline:  (1 of 1) K06027 - vesicle-fusing ATPase (NSF) Genomic Order:  2259
Name:  ? Phvul.002G228500 Secondary Identifier:  ? PAC:37176379
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G228500 0.5kb upstream 0.5kb upstream 12358 true Chr02: 39988937-40001294 Phaseolus vulgaris
Phvul.002G228500 0.5kb upstream 0.5kb upstream 500 false Chr02: 40000795-40001294 Phaseolus vulgaris
Phvul.002G228500 0.5kb downstream 0.5kb downstream 12358 true Chr02: 39988437-40000794 Phaseolus vulgaris
Phvul.002G228500 0.5kb downstream 0.5kb downstream 500 false Chr02: 39988437-39988936 Phaseolus vulgaris
Phvul.002G228500 1.0kb upstream 1.0kb upstream 12858 true Chr02: 39988937-40001794 Phaseolus vulgaris
Phvul.002G228500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40000795-40001794 Phaseolus vulgaris
Phvul.002G228500 1.0kb downstream 1.0kb downstream 12858 true Chr02: 39987937-40000794 Phaseolus vulgaris
Phvul.002G228500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39987937-39988936 Phaseolus vulgaris
Phvul.002G228500 2.0kb upstream 2.0kb upstream 13858 true Chr02: 39988937-40002794 Phaseolus vulgaris
Phvul.002G228500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40000795-40002794 Phaseolus vulgaris
Phvul.002G228500 2.0kb downstream 2.0kb downstream 13858 true Chr02: 39986937-40000794 Phaseolus vulgaris
Phvul.002G228500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39986937-39988936 Phaseolus vulgaris
Phvul.002G228500 5.0kb upstream 5.0kb upstream 16858 true Chr02: 39988937-40005794 Phaseolus vulgaris
Phvul.002G228500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40000795-40005794 Phaseolus vulgaris
Phvul.002G228500 5.0kb downstream 5.0kb downstream 16858 true Chr02: 39983937-40000794 Phaseolus vulgaris
Phvul.002G228500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39983937-39988936 Phaseolus vulgaris
Phvul.002G228500 10.0kb upstream 10.0kb upstream 21858 true Chr02: 39988937-40010794 Phaseolus vulgaris
Phvul.002G228500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40000795-40010794 Phaseolus vulgaris
Phvul.002G228500 10.0kb downstream 10.0kb downstream 21858 true Chr02: 39978937-40000794 Phaseolus vulgaris
Phvul.002G228500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39978937-39988936 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303184 5265 Fabidae View MSA
124065880 5270 Rosid View MSA
123748878 5271 Pentapetalae View MSA
122787277 5272 Eudicot View MSA
122044573 5273 Angiosperm View MSA
121350302 5274 Embryophyte View MSA
123424602 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3842 0.0 29.5846   Low
cufflinks 21.134 0.0 54.7808    
cufflinks 17.1815 0.0 44.4204    
cufflinks 22.2687 0.0 57.7045    
cufflinks 23.3334 0.0 60.5287    
cufflinks 19.7062 0.0 51.0179    
cufflinks 25.0405 0.0 65.2684    
cufflinks 22.8505 0.0 59.4405    
cufflinks 30.7868 0.0 80.9479 High High
cufflinks 16.3397 0.0 42.2356    
cufflinks 27.2088 0.0 70.9933    

0 Strain