Gene : Phvul.002G229100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2271
Name:  ? Phvul.002G229100 Secondary Identifier:  ? PAC:37177491
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G229100 0.5kb upstream 0.5kb upstream 1791 true Chr02: 40150222-40152012 Phaseolus vulgaris
Phvul.002G229100 0.5kb upstream 0.5kb upstream 500 false Chr02: 40150222-40150721 Phaseolus vulgaris
Phvul.002G229100 0.5kb downstream 0.5kb downstream 1791 true Chr02: 40150722-40152512 Phaseolus vulgaris
Phvul.002G229100 0.5kb downstream 0.5kb downstream 500 false Chr02: 40152013-40152512 Phaseolus vulgaris
Phvul.002G229100 1.0kb upstream 1.0kb upstream 2291 true Chr02: 40149722-40152012 Phaseolus vulgaris
Phvul.002G229100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40149722-40150721 Phaseolus vulgaris
Phvul.002G229100 1.0kb downstream 1.0kb downstream 2291 true Chr02: 40150722-40153012 Phaseolus vulgaris
Phvul.002G229100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40152013-40153012 Phaseolus vulgaris
Phvul.002G229100 2.0kb upstream 2.0kb upstream 3291 true Chr02: 40148722-40152012 Phaseolus vulgaris
Phvul.002G229100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40148722-40150721 Phaseolus vulgaris
Phvul.002G229100 2.0kb downstream 2.0kb downstream 3291 true Chr02: 40150722-40154012 Phaseolus vulgaris
Phvul.002G229100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40152013-40154012 Phaseolus vulgaris
Phvul.002G229100 5.0kb upstream 5.0kb upstream 6291 true Chr02: 40145722-40152012 Phaseolus vulgaris
Phvul.002G229100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40145722-40150721 Phaseolus vulgaris
Phvul.002G229100 5.0kb downstream 5.0kb downstream 6291 true Chr02: 40150722-40157012 Phaseolus vulgaris
Phvul.002G229100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40152013-40157012 Phaseolus vulgaris
Phvul.002G229100 10.0kb upstream 10.0kb upstream 11291 true Chr02: 40140722-40152012 Phaseolus vulgaris
Phvul.002G229100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40140722-40150721 Phaseolus vulgaris
Phvul.002G229100 10.0kb downstream 10.0kb downstream 11291 true Chr02: 40150722-40162012 Phaseolus vulgaris
Phvul.002G229100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40152013-40162012 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122309739 5265 Fabidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0412243 0.0 0.204308 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.07392 0.0 7.17819   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.875416 0.0 3.3267    
cufflinks 0.869106 0.0 3.26932    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.267777 0.0 1.11162 Low  

0 Strain