Gene : Phvul.002G228300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10293:SF40 - GLUTAREDOXIN-3 Genomic Order:  2257
Name:  ? Phvul.002G228300 Secondary Identifier:  ? PAC:37174705
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G228300 0.5kb upstream 0.5kb upstream 3121 true Chr02: 39977796-39980916 Phaseolus vulgaris
Phvul.002G228300 0.5kb upstream 0.5kb upstream 500 false Chr02: 39977796-39978295 Phaseolus vulgaris
Phvul.002G228300 0.5kb downstream 0.5kb downstream 3121 true Chr02: 39978296-39981416 Phaseolus vulgaris
Phvul.002G228300 0.5kb downstream 0.5kb downstream 500 false Chr02: 39980917-39981416 Phaseolus vulgaris
Phvul.002G228300 1.0kb upstream 1.0kb upstream 3621 true Chr02: 39977296-39980916 Phaseolus vulgaris
Phvul.002G228300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39977296-39978295 Phaseolus vulgaris
Phvul.002G228300 1.0kb downstream 1.0kb downstream 3621 true Chr02: 39978296-39981916 Phaseolus vulgaris
Phvul.002G228300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39980917-39981916 Phaseolus vulgaris
Phvul.002G228300 2.0kb upstream 2.0kb upstream 4621 true Chr02: 39976296-39980916 Phaseolus vulgaris
Phvul.002G228300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39976296-39978295 Phaseolus vulgaris
Phvul.002G228300 2.0kb downstream 2.0kb downstream 4621 true Chr02: 39978296-39982916 Phaseolus vulgaris
Phvul.002G228300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39980917-39982916 Phaseolus vulgaris
Phvul.002G228300 5.0kb upstream 5.0kb upstream 7621 true Chr02: 39973296-39980916 Phaseolus vulgaris
Phvul.002G228300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39973296-39978295 Phaseolus vulgaris
Phvul.002G228300 5.0kb downstream 5.0kb downstream 7621 true Chr02: 39978296-39985916 Phaseolus vulgaris
Phvul.002G228300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39980917-39985916 Phaseolus vulgaris
Phvul.002G228300 10.0kb upstream 10.0kb upstream 12621 true Chr02: 39968296-39980916 Phaseolus vulgaris
Phvul.002G228300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39968296-39978295 Phaseolus vulgaris
Phvul.002G228300 10.0kb downstream 10.0kb downstream 12621 true Chr02: 39978296-39990916 Phaseolus vulgaris
Phvul.002G228300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39980917-39990916 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040872 5273 Angiosperm View MSA
122306483 5265 Fabidae View MSA
124062011 5270 Rosid View MSA
123737544 5271 Pentapetalae View MSA
122791551 5272 Eudicot View MSA
121349361 5274 Embryophyte View MSA
123428692 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.5475 0.0 79.4    
cufflinks 44.3734 0.0 117.243 High High
cufflinks 17.4624 0.0 45.2244   Low
cufflinks 34.1116 0.0 88.6258    
cufflinks 29.0358 0.0 75.2406    
cufflinks 21.5542 0.0 55.7144   Low
cufflinks 26.9384 0.0 69.7556    
cufflinks 28.0107 0.0 72.63 High  
cufflinks 26.6869 0.0 69.0553    
cufflinks 46.2632 0.0 122.586 High High
cufflinks 40.2878 0.0 105.665 High  

0 Strain