Gene : Phvul.002G229300 P. vulgaris v2.1
Defline:  (1 of 39) PF05678 - VQ motif (VQ) Genomic Order:  2273
Name:  ? Phvul.002G229300 Secondary Identifier:  ? PAC:37176354
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G229300 0.5kb upstream 0.5kb upstream 3278 true Chr02: 40191435-40194712 Phaseolus vulgaris
Phvul.002G229300 0.5kb upstream 0.5kb upstream 500 false Chr02: 40191435-40191934 Phaseolus vulgaris
Phvul.002G229300 0.5kb downstream 0.5kb downstream 3278 true Chr02: 40191935-40195212 Phaseolus vulgaris
Phvul.002G229300 0.5kb downstream 0.5kb downstream 500 false Chr02: 40194713-40195212 Phaseolus vulgaris
Phvul.002G229300 1.0kb upstream 1.0kb upstream 3778 true Chr02: 40190935-40194712 Phaseolus vulgaris
Phvul.002G229300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40190935-40191934 Phaseolus vulgaris
Phvul.002G229300 1.0kb downstream 1.0kb downstream 3778 true Chr02: 40191935-40195712 Phaseolus vulgaris
Phvul.002G229300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40194713-40195712 Phaseolus vulgaris
Phvul.002G229300 2.0kb upstream 2.0kb upstream 4778 true Chr02: 40189935-40194712 Phaseolus vulgaris
Phvul.002G229300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40189935-40191934 Phaseolus vulgaris
Phvul.002G229300 2.0kb downstream 2.0kb downstream 4778 true Chr02: 40191935-40196712 Phaseolus vulgaris
Phvul.002G229300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40194713-40196712 Phaseolus vulgaris
Phvul.002G229300 5.0kb upstream 5.0kb upstream 7778 true Chr02: 40186935-40194712 Phaseolus vulgaris
Phvul.002G229300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40186935-40191934 Phaseolus vulgaris
Phvul.002G229300 5.0kb downstream 5.0kb downstream 7778 true Chr02: 40191935-40199712 Phaseolus vulgaris
Phvul.002G229300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40194713-40199712 Phaseolus vulgaris
Phvul.002G229300 10.0kb upstream 10.0kb upstream 12778 true Chr02: 40181935-40194712 Phaseolus vulgaris
Phvul.002G229300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40181935-40191934 Phaseolus vulgaris
Phvul.002G229300 10.0kb downstream 10.0kb downstream 12778 true Chr02: 40191935-40204712 Phaseolus vulgaris
Phvul.002G229300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40194713-40204712 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307242 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.43704 0.0 22.4518   Low
cufflinks 21.0335 0.0 54.3933    
cufflinks 10.8104 0.0 28.3165    
cufflinks 20.5831 0.0 53.2288    
cufflinks 39.3808 0.0 104.446 High High
cufflinks 19.4159 0.0 50.19    
cufflinks 15.8422 0.0 40.9769    
cufflinks 7.3875 0.0 19.7788   Low
cufflinks 22.1251 0.0 57.2806    
cufflinks 22.7293 0.0 58.8276    
cufflinks 48.4098 0.0 130.424 High High

0 Strain