Gene : Phvul.002G229700 P. vulgaris v2.1
Defline:  (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) Genomic Order:  2277
Name:  ? Phvul.002G229700 Secondary Identifier:  ? PAC:37176957
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G229700 0.5kb upstream 0.5kb upstream 2651 true Chr02: 40224727-40227377 Phaseolus vulgaris
Phvul.002G229700 0.5kb upstream 0.5kb upstream 500 false Chr02: 40226878-40227377 Phaseolus vulgaris
Phvul.002G229700 0.5kb downstream 0.5kb downstream 2651 true Chr02: 40224227-40226877 Phaseolus vulgaris
Phvul.002G229700 0.5kb downstream 0.5kb downstream 500 false Chr02: 40224227-40224726 Phaseolus vulgaris
Phvul.002G229700 1.0kb upstream 1.0kb upstream 3151 true Chr02: 40224727-40227877 Phaseolus vulgaris
Phvul.002G229700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40226878-40227877 Phaseolus vulgaris
Phvul.002G229700 1.0kb downstream 1.0kb downstream 3151 true Chr02: 40223727-40226877 Phaseolus vulgaris
Phvul.002G229700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40223727-40224726 Phaseolus vulgaris
Phvul.002G229700 2.0kb upstream 2.0kb upstream 4151 true Chr02: 40224727-40228877 Phaseolus vulgaris
Phvul.002G229700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40226878-40228877 Phaseolus vulgaris
Phvul.002G229700 2.0kb downstream 2.0kb downstream 4151 true Chr02: 40222727-40226877 Phaseolus vulgaris
Phvul.002G229700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40222727-40224726 Phaseolus vulgaris
Phvul.002G229700 5.0kb upstream 5.0kb upstream 7151 true Chr02: 40224727-40231877 Phaseolus vulgaris
Phvul.002G229700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40226878-40231877 Phaseolus vulgaris
Phvul.002G229700 5.0kb downstream 5.0kb downstream 7151 true Chr02: 40219727-40226877 Phaseolus vulgaris
Phvul.002G229700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40219727-40224726 Phaseolus vulgaris
Phvul.002G229700 10.0kb upstream 10.0kb upstream 12151 true Chr02: 40224727-40236877 Phaseolus vulgaris
Phvul.002G229700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40226878-40236877 Phaseolus vulgaris
Phvul.002G229700 10.0kb downstream 10.0kb downstream 12151 true Chr02: 40214727-40226877 Phaseolus vulgaris
Phvul.002G229700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40214727-40224726 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300537 5265 Fabidae View MSA
124064887 5270 Rosid View MSA
123746932 5271 Pentapetalae View MSA
122792808 5272 Eudicot View MSA
122046027 5273 Angiosperm View MSA
121345659 5274 Embryophyte View MSA
123426333 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 89.9109 0.0 249.804 High  
cufflinks 94.2318 0.0 260.928 High  
cufflinks 422.706 0.0 1488.51 High High
cufflinks 76.2021 0.0 207.458 High  
cufflinks 60.9087 0.0 163.424 High  
cufflinks 273.052 0.0 881.424 High High
cufflinks 9.50962 0.0 25.6319   Low
cufflinks 12.4805 0.0 33.1611   Low
cufflinks 11.7044 0.0 31.1405   Low
cufflinks 46.9175 0.0 122.921 High  
cufflinks 49.2812 0.0 129.931 High  

0 Strain