Gene : Phvul.002G230100 P. vulgaris v2.1
Defline:  (1 of 41) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  2281
Name:  ? Phvul.002G230100 Secondary Identifier:  ? PAC:37178172
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G230100 0.5kb upstream 0.5kb upstream 1454 true Chr02: 40250495-40251948 Phaseolus vulgaris
Phvul.002G230100 0.5kb upstream 0.5kb upstream 500 false Chr02: 40250495-40250994 Phaseolus vulgaris
Phvul.002G230100 0.5kb downstream 0.5kb downstream 1454 true Chr02: 40250995-40252448 Phaseolus vulgaris
Phvul.002G230100 0.5kb downstream 0.5kb downstream 500 false Chr02: 40251949-40252448 Phaseolus vulgaris
Phvul.002G230100 1.0kb upstream 1.0kb upstream 1954 true Chr02: 40249995-40251948 Phaseolus vulgaris
Phvul.002G230100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40249995-40250994 Phaseolus vulgaris
Phvul.002G230100 1.0kb downstream 1.0kb downstream 1954 true Chr02: 40250995-40252948 Phaseolus vulgaris
Phvul.002G230100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40251949-40252948 Phaseolus vulgaris
Phvul.002G230100 2.0kb upstream 2.0kb upstream 2954 true Chr02: 40248995-40251948 Phaseolus vulgaris
Phvul.002G230100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40248995-40250994 Phaseolus vulgaris
Phvul.002G230100 2.0kb downstream 2.0kb downstream 2954 true Chr02: 40250995-40253948 Phaseolus vulgaris
Phvul.002G230100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40251949-40253948 Phaseolus vulgaris
Phvul.002G230100 5.0kb upstream 5.0kb upstream 5954 true Chr02: 40245995-40251948 Phaseolus vulgaris
Phvul.002G230100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40245995-40250994 Phaseolus vulgaris
Phvul.002G230100 5.0kb downstream 5.0kb downstream 5954 true Chr02: 40250995-40256948 Phaseolus vulgaris
Phvul.002G230100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40251949-40256948 Phaseolus vulgaris
Phvul.002G230100 10.0kb upstream 10.0kb upstream 10954 true Chr02: 40240995-40251948 Phaseolus vulgaris
Phvul.002G230100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40240995-40250994 Phaseolus vulgaris
Phvul.002G230100 10.0kb downstream 10.0kb downstream 10954 true Chr02: 40250995-40261948 Phaseolus vulgaris
Phvul.002G230100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40251949-40261948 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254217 5265 Fabidae View MSA
124070981 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.282152 0.0 1.1704 Low  
cufflinks 0.258521 0.0 1.07869 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.28909 0.0 7.90752   High
cufflinks 2.49361 0.0 8.586   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.749822 0.0 2.86831    
cufflinks 0.185703 0.0 0.796046 Low  
cufflinks 0.810594 0.0 3.08212    
cufflinks 0.0243524 0.0 0.130258 Low Low
cufflinks 0.875803 0.0 3.31826    

0 Strain