Gene : Phvul.002G217100 P. vulgaris v2.1
Defline:  (1 of 2) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  2149
Name:  ? Phvul.002G217100 Secondary Identifier:  ? PAC:37175368
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5097 Phaseolus vulgaris pathologic  
Pvulgaris PWY-724 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G217100 0.5kb upstream 0.5kb upstream 6974 true Chr02: 38632739-38639712 Phaseolus vulgaris
Phvul.002G217100 0.5kb upstream 0.5kb upstream 500 false Chr02: 38639213-38639712 Phaseolus vulgaris
Phvul.002G217100 0.5kb downstream 0.5kb downstream 6974 true Chr02: 38632239-38639212 Phaseolus vulgaris
Phvul.002G217100 0.5kb downstream 0.5kb downstream 500 false Chr02: 38632239-38632738 Phaseolus vulgaris
Phvul.002G217100 1.0kb upstream 1.0kb upstream 7474 true Chr02: 38632739-38640212 Phaseolus vulgaris
Phvul.002G217100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38639213-38640212 Phaseolus vulgaris
Phvul.002G217100 1.0kb downstream 1.0kb downstream 7474 true Chr02: 38631739-38639212 Phaseolus vulgaris
Phvul.002G217100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38631739-38632738 Phaseolus vulgaris
Phvul.002G217100 2.0kb upstream 2.0kb upstream 8474 true Chr02: 38632739-38641212 Phaseolus vulgaris
Phvul.002G217100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38639213-38641212 Phaseolus vulgaris
Phvul.002G217100 2.0kb downstream 2.0kb downstream 8474 true Chr02: 38630739-38639212 Phaseolus vulgaris
Phvul.002G217100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38630739-38632738 Phaseolus vulgaris
Phvul.002G217100 5.0kb upstream 5.0kb upstream 11474 true Chr02: 38632739-38644212 Phaseolus vulgaris
Phvul.002G217100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38639213-38644212 Phaseolus vulgaris
Phvul.002G217100 5.0kb downstream 5.0kb downstream 11474 true Chr02: 38627739-38639212 Phaseolus vulgaris
Phvul.002G217100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38627739-38632738 Phaseolus vulgaris
Phvul.002G217100 10.0kb upstream 10.0kb upstream 16474 true Chr02: 38632739-38649212 Phaseolus vulgaris
Phvul.002G217100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38639213-38649212 Phaseolus vulgaris
Phvul.002G217100 10.0kb downstream 10.0kb downstream 16474 true Chr02: 38622739-38639212 Phaseolus vulgaris
Phvul.002G217100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38622739-38632738 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308079 5265 Fabidae View MSA
124071170 5270 Rosid View MSA
123740014 5271 Pentapetalae View MSA
122788260 5272 Eudicot View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.0448 0.0 83.188    
cufflinks 44.4223 0.0 116.866 High  
cufflinks 56.5274 0.0 151.701 High High
cufflinks 43.8079 0.0 114.834 High  
cufflinks 24.9878 0.0 64.5892    
cufflinks 45.9555 0.0 121.201 High  
cufflinks 21.0383 0.0 54.4257   Low
cufflinks 41.8663 0.0 110.002 High  
cufflinks 25.4054 0.0 65.6713    
cufflinks 26.8208 0.0 69.3579    
cufflinks 24.6277 0.0 63.6589    

0 Strain