Gene : Phvul.002G218300 P. vulgaris v2.1
Defline:  (1 of 1) 4.4.1.19 - Phosphosulfolactate synthase / PSL synthase Genomic Order:  2161
Name:  ? Phvul.002G218300 Secondary Identifier:  ? PAC:37176061
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G218300 0.5kb upstream 0.5kb upstream 2781 true Chr02: 38771146-38773926 Phaseolus vulgaris
Phvul.002G218300 0.5kb upstream 0.5kb upstream 500 false Chr02: 38771146-38771645 Phaseolus vulgaris
Phvul.002G218300 0.5kb downstream 0.5kb downstream 2781 true Chr02: 38771646-38774426 Phaseolus vulgaris
Phvul.002G218300 0.5kb downstream 0.5kb downstream 500 false Chr02: 38773927-38774426 Phaseolus vulgaris
Phvul.002G218300 1.0kb upstream 1.0kb upstream 3281 true Chr02: 38770646-38773926 Phaseolus vulgaris
Phvul.002G218300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38770646-38771645 Phaseolus vulgaris
Phvul.002G218300 1.0kb downstream 1.0kb downstream 3281 true Chr02: 38771646-38774926 Phaseolus vulgaris
Phvul.002G218300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38773927-38774926 Phaseolus vulgaris
Phvul.002G218300 2.0kb upstream 2.0kb upstream 4281 true Chr02: 38769646-38773926 Phaseolus vulgaris
Phvul.002G218300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38769646-38771645 Phaseolus vulgaris
Phvul.002G218300 2.0kb downstream 2.0kb downstream 4281 true Chr02: 38771646-38775926 Phaseolus vulgaris
Phvul.002G218300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38773927-38775926 Phaseolus vulgaris
Phvul.002G218300 5.0kb upstream 5.0kb upstream 7281 true Chr02: 38766646-38773926 Phaseolus vulgaris
Phvul.002G218300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38766646-38771645 Phaseolus vulgaris
Phvul.002G218300 5.0kb downstream 5.0kb downstream 7281 true Chr02: 38771646-38778926 Phaseolus vulgaris
Phvul.002G218300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38773927-38778926 Phaseolus vulgaris
Phvul.002G218300 10.0kb upstream 10.0kb upstream 12281 true Chr02: 38761646-38773926 Phaseolus vulgaris
Phvul.002G218300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38761646-38771645 Phaseolus vulgaris
Phvul.002G218300 10.0kb downstream 10.0kb downstream 12281 true Chr02: 38771646-38783926 Phaseolus vulgaris
Phvul.002G218300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38773927-38783926 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312205 5265 Fabidae View MSA
124062504 5270 Rosid View MSA
123738734 5271 Pentapetalae View MSA
122789350 5272 Eudicot View MSA
122046426 5273 Angiosperm View MSA
121347124 5274 Embryophyte View MSA
123380496 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4987 0.0 48.8333   High
cufflinks 15.2294 0.0 40.7593    
cufflinks 1.24448 0.0 4.34066    
cufflinks 18.8323 0.0 49.8433   High
cufflinks 3.57631 0.0 11.1839    
cufflinks 0.237303 0.0 0.952636 Low Low
cufflinks 0.468384 0.0 1.78253 Low Low
cufflinks 0.933103 0.0 3.33881    
cufflinks 0.421213 0.0 1.61987 Low Low
cufflinks 28.8393 0.0 74.7524   High
cufflinks 2.06869 0.0 6.84157    

0 Strain