Gene : Phvul.002G208800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC Genomic Order:  2065
Name:  ? Phvul.002G208800 Secondary Identifier:  ? PAC:37178202
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G208800 0.5kb upstream 0.5kb upstream 25395 true Chr02: 37539697-37565091 Phaseolus vulgaris
Phvul.002G208800 0.5kb upstream 0.5kb upstream 500 false Chr02: 37564592-37565091 Phaseolus vulgaris
Phvul.002G208800 0.5kb downstream 0.5kb downstream 25395 true Chr02: 37539197-37564591 Phaseolus vulgaris
Phvul.002G208800 0.5kb downstream 0.5kb downstream 500 false Chr02: 37539197-37539696 Phaseolus vulgaris
Phvul.002G208800 1.0kb upstream 1.0kb upstream 25895 true Chr02: 37539697-37565591 Phaseolus vulgaris
Phvul.002G208800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37564592-37565591 Phaseolus vulgaris
Phvul.002G208800 1.0kb downstream 1.0kb downstream 25895 true Chr02: 37538697-37564591 Phaseolus vulgaris
Phvul.002G208800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37538697-37539696 Phaseolus vulgaris
Phvul.002G208800 2.0kb upstream 2.0kb upstream 26895 true Chr02: 37539697-37566591 Phaseolus vulgaris
Phvul.002G208800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37564592-37566591 Phaseolus vulgaris
Phvul.002G208800 2.0kb downstream 2.0kb downstream 26895 true Chr02: 37537697-37564591 Phaseolus vulgaris
Phvul.002G208800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37537697-37539696 Phaseolus vulgaris
Phvul.002G208800 5.0kb upstream 5.0kb upstream 29895 true Chr02: 37539697-37569591 Phaseolus vulgaris
Phvul.002G208800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37564592-37569591 Phaseolus vulgaris
Phvul.002G208800 5.0kb downstream 5.0kb downstream 29895 true Chr02: 37534697-37564591 Phaseolus vulgaris
Phvul.002G208800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37534697-37539696 Phaseolus vulgaris
Phvul.002G208800 10.0kb upstream 10.0kb upstream 34895 true Chr02: 37539697-37574591 Phaseolus vulgaris
Phvul.002G208800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37564592-37574591 Phaseolus vulgaris
Phvul.002G208800 10.0kb downstream 10.0kb downstream 34895 true Chr02: 37529697-37564591 Phaseolus vulgaris
Phvul.002G208800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37529697-37539696 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313280 5265 Fabidae View MSA
124074915 5270 Rosid View MSA
123753356 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.08925 0.0 21.956    
cufflinks 2.26679 0.0 18.0205    
cufflinks 7.75805 0.0 44.7136   High
cufflinks 1.58566 0.0 14.1615    
cufflinks 1.85333 0.0 17.4143    
cufflinks 5.85104 0.0 37.5568   High
cufflinks 1.74102 0.0 15.4647    
cufflinks 2.69082 0.0 17.6682    
cufflinks 1.53938 0.0 18.2615    
cufflinks 2.75478 0.0 26.6503    
cufflinks 1.48112 0.0 19.1059    

0 Strain