Gene : Phvul.002G210900 P. vulgaris v2.1
Defline:  (1 of 3) 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Genomic Order:  2087
Name:  ? Phvul.002G210900 Secondary Identifier:  ? PAC:37178536
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris RIBOSYN2-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G210900 0.5kb upstream 0.5kb upstream 5049 true Chr02: 37816188-37821236 Phaseolus vulgaris
Phvul.002G210900 0.5kb upstream 0.5kb upstream 500 false Chr02: 37816188-37816687 Phaseolus vulgaris
Phvul.002G210900 0.5kb downstream 0.5kb downstream 5049 true Chr02: 37816688-37821736 Phaseolus vulgaris
Phvul.002G210900 0.5kb downstream 0.5kb downstream 500 false Chr02: 37821237-37821736 Phaseolus vulgaris
Phvul.002G210900 1.0kb upstream 1.0kb upstream 5549 true Chr02: 37815688-37821236 Phaseolus vulgaris
Phvul.002G210900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37815688-37816687 Phaseolus vulgaris
Phvul.002G210900 1.0kb downstream 1.0kb downstream 5549 true Chr02: 37816688-37822236 Phaseolus vulgaris
Phvul.002G210900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37821237-37822236 Phaseolus vulgaris
Phvul.002G210900 2.0kb upstream 2.0kb upstream 6549 true Chr02: 37814688-37821236 Phaseolus vulgaris
Phvul.002G210900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37814688-37816687 Phaseolus vulgaris
Phvul.002G210900 2.0kb downstream 2.0kb downstream 6549 true Chr02: 37816688-37823236 Phaseolus vulgaris
Phvul.002G210900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37821237-37823236 Phaseolus vulgaris
Phvul.002G210900 5.0kb upstream 5.0kb upstream 9549 true Chr02: 37811688-37821236 Phaseolus vulgaris
Phvul.002G210900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37811688-37816687 Phaseolus vulgaris
Phvul.002G210900 5.0kb downstream 5.0kb downstream 9549 true Chr02: 37816688-37826236 Phaseolus vulgaris
Phvul.002G210900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37821237-37826236 Phaseolus vulgaris
Phvul.002G210900 10.0kb upstream 10.0kb upstream 14549 true Chr02: 37806688-37821236 Phaseolus vulgaris
Phvul.002G210900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37806688-37816687 Phaseolus vulgaris
Phvul.002G210900 10.0kb downstream 10.0kb downstream 14549 true Chr02: 37816688-37831236 Phaseolus vulgaris
Phvul.002G210900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37821237-37831236 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041066 5273 Angiosperm View MSA
122311687 5265 Fabidae View MSA
124067680 5270 Rosid View MSA
123753464 5271 Pentapetalae View MSA
122788466 5272 Eudicot View MSA
121346573 5274 Embryophyte View MSA
123428678 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.34874 0.0 21.9238    
cufflinks 12.8048 0.0 33.1332    
cufflinks 25.1157 0.0 65.7331   High
cufflinks 13.3743 0.0 34.6305    
cufflinks 11.5128 0.0 29.9139    
cufflinks 18.3612 0.0 47.5622   High
cufflinks 8.93971 0.0 23.3698    
cufflinks 9.79537 0.0 25.4872    
cufflinks 7.7839 0.0 20.523   Low
cufflinks 8.83706 0.0 23.149    
cufflinks 10.1834 0.0 26.5317    

0 Strain