Gene : Phvul.002G211100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33735:SF4 - EXPRESSED PROTEIN Genomic Order:  2089
Name:  ? Phvul.002G211100 Secondary Identifier:  ? PAC:37174416
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G211100 0.5kb upstream 0.5kb upstream 2171 true Chr02: 37830723-37832893 Phaseolus vulgaris
Phvul.002G211100 0.5kb upstream 0.5kb upstream 500 false Chr02: 37832394-37832893 Phaseolus vulgaris
Phvul.002G211100 0.5kb downstream 0.5kb downstream 2171 true Chr02: 37830223-37832393 Phaseolus vulgaris
Phvul.002G211100 0.5kb downstream 0.5kb downstream 500 false Chr02: 37830223-37830722 Phaseolus vulgaris
Phvul.002G211100 1.0kb upstream 1.0kb upstream 2671 true Chr02: 37830723-37833393 Phaseolus vulgaris
Phvul.002G211100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37832394-37833393 Phaseolus vulgaris
Phvul.002G211100 1.0kb downstream 1.0kb downstream 2671 true Chr02: 37829723-37832393 Phaseolus vulgaris
Phvul.002G211100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37829723-37830722 Phaseolus vulgaris
Phvul.002G211100 2.0kb upstream 2.0kb upstream 3671 true Chr02: 37830723-37834393 Phaseolus vulgaris
Phvul.002G211100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37832394-37834393 Phaseolus vulgaris
Phvul.002G211100 2.0kb downstream 2.0kb downstream 3671 true Chr02: 37828723-37832393 Phaseolus vulgaris
Phvul.002G211100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37828723-37830722 Phaseolus vulgaris
Phvul.002G211100 5.0kb upstream 5.0kb upstream 6671 true Chr02: 37830723-37837393 Phaseolus vulgaris
Phvul.002G211100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37832394-37837393 Phaseolus vulgaris
Phvul.002G211100 5.0kb downstream 5.0kb downstream 6671 true Chr02: 37825723-37832393 Phaseolus vulgaris
Phvul.002G211100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37825723-37830722 Phaseolus vulgaris
Phvul.002G211100 10.0kb upstream 10.0kb upstream 11671 true Chr02: 37830723-37842393 Phaseolus vulgaris
Phvul.002G211100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37832394-37842393 Phaseolus vulgaris
Phvul.002G211100 10.0kb downstream 10.0kb downstream 11671 true Chr02: 37820723-37832393 Phaseolus vulgaris
Phvul.002G211100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37820723-37830722 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028643 5273 Angiosperm View MSA
122303913 5265 Fabidae View MSA
124066096 5270 Rosid View MSA
123741329 5271 Pentapetalae View MSA
122796561 5272 Eudicot View MSA
121298100 5274 Embryophyte View MSA
123336097 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.6809 0.0 172.527 High High
cufflinks 8.627 0.0 25.4832    
cufflinks 2.68249 0.0 9.03512    
cufflinks 12.9665 0.0 36.9841    
cufflinks 9.29649 0.0 27.5318    
cufflinks 1.35273 0.0 4.89655   Low
cufflinks 3.27003 0.0 10.7721    
cufflinks 0.871823 0.0 3.25736   Low
cufflinks 5.04306 0.0 15.8595    
cufflinks 61.8404 0.0 159.848 High High
cufflinks 9.62573 0.0 28.2994    

0 Strain