Gene : Phvul.002G211200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR36066:SF2 - TRANSCRIPTION FACTOR SAC51-RELATED Genomic Order:  2090
Name:  ? Phvul.002G211200 Secondary Identifier:  ? PAC:37176326
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G211200 0.5kb upstream 0.5kb upstream 4492 true Chr02: 37842378-37846869 Phaseolus vulgaris
Phvul.002G211200 0.5kb upstream 0.5kb upstream 500 false Chr02: 37842378-37842877 Phaseolus vulgaris
Phvul.002G211200 0.5kb downstream 0.5kb downstream 4492 true Chr02: 37842878-37847369 Phaseolus vulgaris
Phvul.002G211200 0.5kb downstream 0.5kb downstream 500 false Chr02: 37846870-37847369 Phaseolus vulgaris
Phvul.002G211200 1.0kb upstream 1.0kb upstream 4992 true Chr02: 37841878-37846869 Phaseolus vulgaris
Phvul.002G211200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37841878-37842877 Phaseolus vulgaris
Phvul.002G211200 1.0kb downstream 1.0kb downstream 4992 true Chr02: 37842878-37847869 Phaseolus vulgaris
Phvul.002G211200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37846870-37847869 Phaseolus vulgaris
Phvul.002G211200 2.0kb upstream 2.0kb upstream 5992 true Chr02: 37840878-37846869 Phaseolus vulgaris
Phvul.002G211200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37840878-37842877 Phaseolus vulgaris
Phvul.002G211200 2.0kb downstream 2.0kb downstream 5992 true Chr02: 37842878-37848869 Phaseolus vulgaris
Phvul.002G211200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37846870-37848869 Phaseolus vulgaris
Phvul.002G211200 5.0kb upstream 5.0kb upstream 8992 true Chr02: 37837878-37846869 Phaseolus vulgaris
Phvul.002G211200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37837878-37842877 Phaseolus vulgaris
Phvul.002G211200 5.0kb downstream 5.0kb downstream 8992 true Chr02: 37842878-37851869 Phaseolus vulgaris
Phvul.002G211200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37846870-37851869 Phaseolus vulgaris
Phvul.002G211200 10.0kb upstream 10.0kb upstream 13992 true Chr02: 37832878-37846869 Phaseolus vulgaris
Phvul.002G211200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37832878-37842877 Phaseolus vulgaris
Phvul.002G211200 10.0kb downstream 10.0kb downstream 13992 true Chr02: 37842878-37856869 Phaseolus vulgaris
Phvul.002G211200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37846870-37856869 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255335 5265 Fabidae View MSA
123997102 5270 Rosid View MSA
123750952 5271 Pentapetalae View MSA
122794096 5272 Eudicot View MSA
122042740 5273 Angiosperm View MSA
121310013 5274 Embryophyte View MSA
123347619 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.75027 0.0 15.3375   Low
cufflinks 5.89188 0.0 18.6438    
cufflinks 9.83256 0.0 28.3763    
cufflinks 4.04883 0.0 13.8868   Low
cufflinks 14.6898 0.0 41.5096    
cufflinks 9.24315 0.0 26.9859    
cufflinks 15.3315 0.0 43.1277    
cufflinks 8.23157 0.0 24.4649    
cufflinks 15.9275 0.0 44.6932   High
cufflinks 13.073 0.0 36.8585    
cufflinks 15.3109 0.0 43.1039    

0 Strain