Gene : Phvul.002G209900 P. vulgaris v2.1
Defline:  (1 of 9) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  2076
Name:  ? Phvul.002G209900 Secondary Identifier:  ? PAC:37176906
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G209900 0.5kb upstream 0.5kb upstream 10771 true Chr02: 37666477-37677247 Phaseolus vulgaris
Phvul.002G209900 0.5kb upstream 0.5kb upstream 500 false Chr02: 37666477-37666976 Phaseolus vulgaris
Phvul.002G209900 0.5kb downstream 0.5kb downstream 10771 true Chr02: 37666977-37677747 Phaseolus vulgaris
Phvul.002G209900 0.5kb downstream 0.5kb downstream 500 false Chr02: 37677248-37677747 Phaseolus vulgaris
Phvul.002G209900 1.0kb upstream 1.0kb upstream 11271 true Chr02: 37665977-37677247 Phaseolus vulgaris
Phvul.002G209900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37665977-37666976 Phaseolus vulgaris
Phvul.002G209900 1.0kb downstream 1.0kb downstream 11271 true Chr02: 37666977-37678247 Phaseolus vulgaris
Phvul.002G209900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37677248-37678247 Phaseolus vulgaris
Phvul.002G209900 2.0kb upstream 2.0kb upstream 12271 true Chr02: 37664977-37677247 Phaseolus vulgaris
Phvul.002G209900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37664977-37666976 Phaseolus vulgaris
Phvul.002G209900 2.0kb downstream 2.0kb downstream 12271 true Chr02: 37666977-37679247 Phaseolus vulgaris
Phvul.002G209900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37677248-37679247 Phaseolus vulgaris
Phvul.002G209900 5.0kb upstream 5.0kb upstream 15271 true Chr02: 37661977-37677247 Phaseolus vulgaris
Phvul.002G209900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37661977-37666976 Phaseolus vulgaris
Phvul.002G209900 5.0kb downstream 5.0kb downstream 15271 true Chr02: 37666977-37682247 Phaseolus vulgaris
Phvul.002G209900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37677248-37682247 Phaseolus vulgaris
Phvul.002G209900 10.0kb upstream 10.0kb upstream 20271 true Chr02: 37656977-37677247 Phaseolus vulgaris
Phvul.002G209900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37656977-37666976 Phaseolus vulgaris
Phvul.002G209900 10.0kb downstream 10.0kb downstream 20271 true Chr02: 37666977-37687247 Phaseolus vulgaris
Phvul.002G209900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37677248-37687247 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027947 5273 Angiosperm View MSA
122311960 5265 Fabidae View MSA
124070963 5270 Rosid View MSA
123753362 5271 Pentapetalae View MSA
122775074 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0532504 0.0 0.248717 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0333022 0.0 0.165214 Low  

0 Strain