Gene : Phvul.002G210000 P. vulgaris v2.1
Defline:  (1 of 9) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  2077
Name:  ? Phvul.002G210000 Secondary Identifier:  ? PAC:37175132
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G210000 0.5kb upstream 0.5kb upstream 2703 true Chr02: 37678487-37681189 Phaseolus vulgaris
Phvul.002G210000 0.5kb upstream 0.5kb upstream 500 false Chr02: 37678487-37678986 Phaseolus vulgaris
Phvul.002G210000 0.5kb downstream 0.5kb downstream 2703 true Chr02: 37678987-37681689 Phaseolus vulgaris
Phvul.002G210000 0.5kb downstream 0.5kb downstream 500 false Chr02: 37681190-37681689 Phaseolus vulgaris
Phvul.002G210000 1.0kb upstream 1.0kb upstream 3203 true Chr02: 37677987-37681189 Phaseolus vulgaris
Phvul.002G210000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37677987-37678986 Phaseolus vulgaris
Phvul.002G210000 1.0kb downstream 1.0kb downstream 3203 true Chr02: 37678987-37682189 Phaseolus vulgaris
Phvul.002G210000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37681190-37682189 Phaseolus vulgaris
Phvul.002G210000 2.0kb upstream 2.0kb upstream 4203 true Chr02: 37676987-37681189 Phaseolus vulgaris
Phvul.002G210000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37676987-37678986 Phaseolus vulgaris
Phvul.002G210000 2.0kb downstream 2.0kb downstream 4203 true Chr02: 37678987-37683189 Phaseolus vulgaris
Phvul.002G210000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37681190-37683189 Phaseolus vulgaris
Phvul.002G210000 5.0kb upstream 5.0kb upstream 7203 true Chr02: 37673987-37681189 Phaseolus vulgaris
Phvul.002G210000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37673987-37678986 Phaseolus vulgaris
Phvul.002G210000 5.0kb downstream 5.0kb downstream 7203 true Chr02: 37678987-37686189 Phaseolus vulgaris
Phvul.002G210000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37681190-37686189 Phaseolus vulgaris
Phvul.002G210000 10.0kb upstream 10.0kb upstream 12203 true Chr02: 37668987-37681189 Phaseolus vulgaris
Phvul.002G210000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37668987-37678986 Phaseolus vulgaris
Phvul.002G210000 10.0kb downstream 10.0kb downstream 12203 true Chr02: 37678987-37691189 Phaseolus vulgaris
Phvul.002G210000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37681190-37691189 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301776 5265 Fabidae View MSA
124037273 5270 Rosid View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.7847 0.0 8.37805    
cufflinks 0.568611 0.0 2.63362    
cufflinks 2.21545 0.0 9.91578    
cufflinks 0.269592 0.0 1.06905 Low Low
cufflinks 7.49171 0.0 24.8547   High
cufflinks 0.218872 0.0 0.87242 Low Low
cufflinks 7.05063 0.0 23.3121   High
cufflinks 2.10232 0.0 9.33569    
cufflinks 5.17062 0.0 21.4443    
cufflinks 2.28706 0.0 10.0858    
cufflinks 5.95119 0.0 20.6187    

0 Strain