Gene : Phvul.002G212450 P. vulgaris v2.1
Defline:  (1 of 4) PTHR11945:SF179 - MADS-BOX PROTEIN SVP Genomic Order:  2104
Name:  ? Phvul.002G212450 Secondary Identifier:  ? PAC:37176135
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G212450 0.5kb upstream 0.5kb upstream 16922 true Chr02: 38098651-38115572 Phaseolus vulgaris
Phvul.002G212450 0.5kb upstream 0.5kb upstream 500 false Chr02: 38098651-38099150 Phaseolus vulgaris
Phvul.002G212450 0.5kb downstream 0.5kb downstream 16922 true Chr02: 38099151-38116072 Phaseolus vulgaris
Phvul.002G212450 0.5kb downstream 0.5kb downstream 500 false Chr02: 38115573-38116072 Phaseolus vulgaris
Phvul.002G212450 1.0kb upstream 1.0kb upstream 17422 true Chr02: 38098151-38115572 Phaseolus vulgaris
Phvul.002G212450 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38098151-38099150 Phaseolus vulgaris
Phvul.002G212450 1.0kb downstream 1.0kb downstream 17422 true Chr02: 38099151-38116572 Phaseolus vulgaris
Phvul.002G212450 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38115573-38116572 Phaseolus vulgaris
Phvul.002G212450 2.0kb upstream 2.0kb upstream 18422 true Chr02: 38097151-38115572 Phaseolus vulgaris
Phvul.002G212450 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38097151-38099150 Phaseolus vulgaris
Phvul.002G212450 2.0kb downstream 2.0kb downstream 18422 true Chr02: 38099151-38117572 Phaseolus vulgaris
Phvul.002G212450 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38115573-38117572 Phaseolus vulgaris
Phvul.002G212450 5.0kb upstream 5.0kb upstream 21422 true Chr02: 38094151-38115572 Phaseolus vulgaris
Phvul.002G212450 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38094151-38099150 Phaseolus vulgaris
Phvul.002G212450 5.0kb downstream 5.0kb downstream 21422 true Chr02: 38099151-38120572 Phaseolus vulgaris
Phvul.002G212450 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38115573-38120572 Phaseolus vulgaris
Phvul.002G212450 10.0kb upstream 10.0kb upstream 26422 true Chr02: 38089151-38115572 Phaseolus vulgaris
Phvul.002G212450 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38089151-38099150 Phaseolus vulgaris
Phvul.002G212450 10.0kb downstream 10.0kb downstream 26422 true Chr02: 38099151-38125572 Phaseolus vulgaris
Phvul.002G212450 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38115573-38125572 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296327 5265 Fabidae View MSA
124040371 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.02565 0.0 7.97926    
cufflinks 0.19949 0.0 0.857443 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.800719 0.0 5.37031    
cufflinks 0.584588 0.0 2.28379 Low  
cufflinks 3.53519 0.0 22.1094   High
cufflinks 2.73749 0.0 20.2655    
cufflinks 0.845218 0.0 6.98972    
cufflinks 0.578846 0.0 4.08937    
cufflinks 0.0230061 0.0 0.166393 Low Low
cufflinks 2.15274 0.0 13.8743    

0 Strain