Gene : Phvul.002G213100 P. vulgaris v2.1
Defline:  (1 of 1) K01431 - beta-ureidopropionase (UPB1) Genomic Order:  2110
Name:  ? Phvul.002G213100 Secondary Identifier:  ? PAC:37178446
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3982 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6430 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G213100 0.5kb upstream 0.5kb upstream 3660 true Chr02: 38181769-38185428 Phaseolus vulgaris
Phvul.002G213100 0.5kb upstream 0.5kb upstream 500 false Chr02: 38181769-38182268 Phaseolus vulgaris
Phvul.002G213100 0.5kb downstream 0.5kb downstream 3660 true Chr02: 38182269-38185928 Phaseolus vulgaris
Phvul.002G213100 0.5kb downstream 0.5kb downstream 500 false Chr02: 38185429-38185928 Phaseolus vulgaris
Phvul.002G213100 1.0kb upstream 1.0kb upstream 4160 true Chr02: 38181269-38185428 Phaseolus vulgaris
Phvul.002G213100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38181269-38182268 Phaseolus vulgaris
Phvul.002G213100 1.0kb downstream 1.0kb downstream 4160 true Chr02: 38182269-38186428 Phaseolus vulgaris
Phvul.002G213100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38185429-38186428 Phaseolus vulgaris
Phvul.002G213100 2.0kb upstream 2.0kb upstream 5160 true Chr02: 38180269-38185428 Phaseolus vulgaris
Phvul.002G213100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38180269-38182268 Phaseolus vulgaris
Phvul.002G213100 2.0kb downstream 2.0kb downstream 5160 true Chr02: 38182269-38187428 Phaseolus vulgaris
Phvul.002G213100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38185429-38187428 Phaseolus vulgaris
Phvul.002G213100 5.0kb upstream 5.0kb upstream 8160 true Chr02: 38177269-38185428 Phaseolus vulgaris
Phvul.002G213100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38177269-38182268 Phaseolus vulgaris
Phvul.002G213100 5.0kb downstream 5.0kb downstream 8160 true Chr02: 38182269-38190428 Phaseolus vulgaris
Phvul.002G213100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38185429-38190428 Phaseolus vulgaris
Phvul.002G213100 10.0kb upstream 10.0kb upstream 13160 true Chr02: 38172269-38185428 Phaseolus vulgaris
Phvul.002G213100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38172269-38182268 Phaseolus vulgaris
Phvul.002G213100 10.0kb downstream 10.0kb downstream 13160 true Chr02: 38182269-38195428 Phaseolus vulgaris
Phvul.002G213100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38185429-38195428 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302411 5265 Fabidae View MSA
124062132 5270 Rosid View MSA
123750342 5271 Pentapetalae View MSA
122790963 5272 Eudicot View MSA
122045387 5273 Angiosperm View MSA
121345215 5274 Embryophyte View MSA
123425412 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.291 0.0 88.8089 High High
cufflinks 13.5725 0.0 35.9346    
cufflinks 24.5072 0.0 63.3922    
cufflinks 28.1616 0.0 72.7979   High
cufflinks 12.779 0.0 34.1655    
cufflinks 13.8757 0.0 36.6677    
cufflinks 10.2314 0.0 27.6645   Low
cufflinks 9.44938 0.0 25.6202   Low
cufflinks 12.9095 0.0 34.3374    
cufflinks 19.7835 0.0 51.4358    
cufflinks 13.3882 0.0 35.6221    

0 Strain