Gene : Phvul.002G213200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33917:SF1 - PROTEIN EXECUTER 1, CHLOROPLASTIC Genomic Order:  2111
Name:  ? Phvul.002G213200 Secondary Identifier:  ? PAC:37178708
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G213200 0.5kb upstream 0.5kb upstream 12742 true Chr02: 38186285-38199026 Phaseolus vulgaris
Phvul.002G213200 0.5kb upstream 0.5kb upstream 500 false Chr02: 38186285-38186784 Phaseolus vulgaris
Phvul.002G213200 0.5kb downstream 0.5kb downstream 12742 true Chr02: 38186785-38199526 Phaseolus vulgaris
Phvul.002G213200 0.5kb downstream 0.5kb downstream 500 false Chr02: 38199027-38199526 Phaseolus vulgaris
Phvul.002G213200 1.0kb upstream 1.0kb upstream 13242 true Chr02: 38185785-38199026 Phaseolus vulgaris
Phvul.002G213200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38185785-38186784 Phaseolus vulgaris
Phvul.002G213200 1.0kb downstream 1.0kb downstream 13242 true Chr02: 38186785-38200026 Phaseolus vulgaris
Phvul.002G213200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38199027-38200026 Phaseolus vulgaris
Phvul.002G213200 2.0kb upstream 2.0kb upstream 14242 true Chr02: 38184785-38199026 Phaseolus vulgaris
Phvul.002G213200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38184785-38186784 Phaseolus vulgaris
Phvul.002G213200 2.0kb downstream 2.0kb downstream 14242 true Chr02: 38186785-38201026 Phaseolus vulgaris
Phvul.002G213200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38199027-38201026 Phaseolus vulgaris
Phvul.002G213200 5.0kb upstream 5.0kb upstream 17242 true Chr02: 38181785-38199026 Phaseolus vulgaris
Phvul.002G213200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38181785-38186784 Phaseolus vulgaris
Phvul.002G213200 5.0kb downstream 5.0kb downstream 17242 true Chr02: 38186785-38204026 Phaseolus vulgaris
Phvul.002G213200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38199027-38204026 Phaseolus vulgaris
Phvul.002G213200 10.0kb upstream 10.0kb upstream 22242 true Chr02: 38176785-38199026 Phaseolus vulgaris
Phvul.002G213200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38176785-38186784 Phaseolus vulgaris
Phvul.002G213200 10.0kb downstream 10.0kb downstream 22242 true Chr02: 38186785-38209026 Phaseolus vulgaris
Phvul.002G213200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38199027-38209026 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041046 5273 Angiosperm View MSA
122305253 5265 Fabidae View MSA
124060610 5270 Rosid View MSA
123739976 5271 Pentapetalae View MSA
122789111 5272 Eudicot View MSA
121347827 5274 Embryophyte View MSA
123425558 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.6872 0.0 56.2221    
cufflinks 12.9043 0.0 41.0823    
cufflinks 50.9386 0.0 186.525 High High
cufflinks 18.246 0.0 57.9894    
cufflinks 10.9803 0.0 31.1989    
cufflinks 33.6011 0.0 113.46 High High
cufflinks 8.85209 0.0 29.0132   Low
cufflinks 10.2708 0.0 33.1655    
cufflinks 8.8538 0.0 29.2275   Low
cufflinks 22.6396 0.0 72.6472    
cufflinks 11.6704 0.0 37.602    

0 Strain