Gene : Phvul.002G212300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24078//PTHR24078:SF316 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  2103
Name:  ? Phvul.002G212300 Secondary Identifier:  ? PAC:37176251
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G212300 0.5kb upstream 0.5kb upstream 1943 true Chr02: 38086210-38088152 Phaseolus vulgaris
Phvul.002G212300 0.5kb upstream 0.5kb upstream 500 false Chr02: 38087653-38088152 Phaseolus vulgaris
Phvul.002G212300 0.5kb downstream 0.5kb downstream 1943 true Chr02: 38085710-38087652 Phaseolus vulgaris
Phvul.002G212300 0.5kb downstream 0.5kb downstream 500 false Chr02: 38085710-38086209 Phaseolus vulgaris
Phvul.002G212300 1.0kb upstream 1.0kb upstream 2443 true Chr02: 38086210-38088652 Phaseolus vulgaris
Phvul.002G212300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38087653-38088652 Phaseolus vulgaris
Phvul.002G212300 1.0kb downstream 1.0kb downstream 2443 true Chr02: 38085210-38087652 Phaseolus vulgaris
Phvul.002G212300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38085210-38086209 Phaseolus vulgaris
Phvul.002G212300 2.0kb upstream 2.0kb upstream 3443 true Chr02: 38086210-38089652 Phaseolus vulgaris
Phvul.002G212300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38087653-38089652 Phaseolus vulgaris
Phvul.002G212300 2.0kb downstream 2.0kb downstream 3443 true Chr02: 38084210-38087652 Phaseolus vulgaris
Phvul.002G212300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38084210-38086209 Phaseolus vulgaris
Phvul.002G212300 5.0kb upstream 5.0kb upstream 6443 true Chr02: 38086210-38092652 Phaseolus vulgaris
Phvul.002G212300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38087653-38092652 Phaseolus vulgaris
Phvul.002G212300 5.0kb downstream 5.0kb downstream 6443 true Chr02: 38081210-38087652 Phaseolus vulgaris
Phvul.002G212300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38081210-38086209 Phaseolus vulgaris
Phvul.002G212300 10.0kb upstream 10.0kb upstream 11443 true Chr02: 38086210-38097652 Phaseolus vulgaris
Phvul.002G212300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38087653-38097652 Phaseolus vulgaris
Phvul.002G212300 10.0kb downstream 10.0kb downstream 11443 true Chr02: 38076210-38087652 Phaseolus vulgaris
Phvul.002G212300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38076210-38086209 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314210 5265 Fabidae View MSA
124074016 5270 Rosid View MSA
123741579 5271 Pentapetalae View MSA
122797232 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2857 0.0 39.8041    
cufflinks 25.9661 0.0 67.1383   High
cufflinks 16.5194 0.0 43.0623    
cufflinks 27.8507 0.0 72.1422   High
cufflinks 22.3997 0.0 57.899    
cufflinks 14.8417 0.0 38.777    
cufflinks 13.5968 0.0 35.5118   Low
cufflinks 14.3666 0.0 37.5813   Low
cufflinks 16.6406 0.0 43.1731    
cufflinks 26.9043 0.0 69.595   High
cufflinks 23.5955 0.0 60.9995    

0 Strain