Gene : Phvul.002G197500 P. vulgaris v2.1
Defline:  (1 of 1) K06875 - programmed cell death protein 5 (PDCD5, TFAR19) Genomic Order:  1953
Name:  ? Phvul.002G197500 Secondary Identifier:  ? PAC:37177606
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G197500 0.5kb upstream 0.5kb upstream 3352 true Chr02: 36225821-36229172 Phaseolus vulgaris
Phvul.002G197500 0.5kb upstream 0.5kb upstream 500 false Chr02: 36228673-36229172 Phaseolus vulgaris
Phvul.002G197500 0.5kb downstream 0.5kb downstream 3352 true Chr02: 36225321-36228672 Phaseolus vulgaris
Phvul.002G197500 0.5kb downstream 0.5kb downstream 500 false Chr02: 36225321-36225820 Phaseolus vulgaris
Phvul.002G197500 1.0kb upstream 1.0kb upstream 3852 true Chr02: 36225821-36229672 Phaseolus vulgaris
Phvul.002G197500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 36228673-36229672 Phaseolus vulgaris
Phvul.002G197500 1.0kb downstream 1.0kb downstream 3852 true Chr02: 36224821-36228672 Phaseolus vulgaris
Phvul.002G197500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 36224821-36225820 Phaseolus vulgaris
Phvul.002G197500 2.0kb upstream 2.0kb upstream 4852 true Chr02: 36225821-36230672 Phaseolus vulgaris
Phvul.002G197500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 36228673-36230672 Phaseolus vulgaris
Phvul.002G197500 2.0kb downstream 2.0kb downstream 4852 true Chr02: 36223821-36228672 Phaseolus vulgaris
Phvul.002G197500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 36223821-36225820 Phaseolus vulgaris
Phvul.002G197500 5.0kb upstream 5.0kb upstream 7852 true Chr02: 36225821-36233672 Phaseolus vulgaris
Phvul.002G197500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 36228673-36233672 Phaseolus vulgaris
Phvul.002G197500 5.0kb downstream 5.0kb downstream 7852 true Chr02: 36220821-36228672 Phaseolus vulgaris
Phvul.002G197500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 36220821-36225820 Phaseolus vulgaris
Phvul.002G197500 10.0kb upstream 10.0kb upstream 12852 true Chr02: 36225821-36238672 Phaseolus vulgaris
Phvul.002G197500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 36228673-36238672 Phaseolus vulgaris
Phvul.002G197500 10.0kb downstream 10.0kb downstream 12852 true Chr02: 36215821-36228672 Phaseolus vulgaris
Phvul.002G197500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 36215821-36225820 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300116 5265 Fabidae View MSA
124064859 5270 Rosid View MSA
123737967 5271 Pentapetalae View MSA
122786334 5272 Eudicot View MSA
122044055 5273 Angiosperm View MSA
121343869 5274 Embryophyte View MSA
123426803 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 219.541 0.0 611.365 High High
cufflinks 69.5997 0.0 180.056 High  
cufflinks 53.1099 0.0 137.414 High  
cufflinks 110.521 0.0 289.733 High  
cufflinks 72.8057 0.0 188.299 High  
cufflinks 24.4551 0.0 65.6135   Low
cufflinks 53.8053 0.0 139.108 High  
cufflinks 57.1694 0.0 147.784 High  
cufflinks 55.3559 0.0 143.093 High  
cufflinks 86.7183 0.0 225.33 High  
cufflinks 76.5157 0.0 198.162 High  

0 Strain