Gene : Phvul.002G202600 P. vulgaris v2.1
Genomic Order:  2005 Name:  ? Phvul.002G202600
Secondary Identifier:  ? PAC:37176588
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G202600 0.5kb upstream 0.5kb upstream 4958 true Chr02: 36910678-36915635 Phaseolus vulgaris
Phvul.002G202600 0.5kb upstream 0.5kb upstream 500 false Chr02: 36915136-36915635 Phaseolus vulgaris
Phvul.002G202600 0.5kb downstream 0.5kb downstream 4958 true Chr02: 36910178-36915135 Phaseolus vulgaris
Phvul.002G202600 0.5kb downstream 0.5kb downstream 500 false Chr02: 36910178-36910677 Phaseolus vulgaris
Phvul.002G202600 1.0kb upstream 1.0kb upstream 5458 true Chr02: 36910678-36916135 Phaseolus vulgaris
Phvul.002G202600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 36915136-36916135 Phaseolus vulgaris
Phvul.002G202600 1.0kb downstream 1.0kb downstream 5458 true Chr02: 36909678-36915135 Phaseolus vulgaris
Phvul.002G202600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 36909678-36910677 Phaseolus vulgaris
Phvul.002G202600 2.0kb upstream 2.0kb upstream 6458 true Chr02: 36910678-36917135 Phaseolus vulgaris
Phvul.002G202600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 36915136-36917135 Phaseolus vulgaris
Phvul.002G202600 2.0kb downstream 2.0kb downstream 6458 true Chr02: 36908678-36915135 Phaseolus vulgaris
Phvul.002G202600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 36908678-36910677 Phaseolus vulgaris
Phvul.002G202600 5.0kb upstream 5.0kb upstream 9458 true Chr02: 36910678-36920135 Phaseolus vulgaris
Phvul.002G202600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 36915136-36920135 Phaseolus vulgaris
Phvul.002G202600 5.0kb downstream 5.0kb downstream 9458 true Chr02: 36905678-36915135 Phaseolus vulgaris
Phvul.002G202600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 36905678-36910677 Phaseolus vulgaris
Phvul.002G202600 10.0kb upstream 10.0kb upstream 14458 true Chr02: 36910678-36925135 Phaseolus vulgaris
Phvul.002G202600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 36915136-36925135 Phaseolus vulgaris
Phvul.002G202600 10.0kb downstream 10.0kb downstream 14458 true Chr02: 36900678-36915135 Phaseolus vulgaris
Phvul.002G202600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 36900678-36910677 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254501 5265 Fabidae View MSA
123996627 5270 Rosid View MSA
123754510 5271 Pentapetalae View MSA
122775883 5272 Eudicot View MSA
122049773 5273 Angiosperm View MSA
121345275 5274 Embryophyte View MSA
123425777 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.42541 0.0 18.3377   High
cufflinks 2.17958 0.0 9.30791    
cufflinks 0.938595 0.0 3.46214   Low
cufflinks 4.24149 0.0 14.1854   High
cufflinks 0.826882 0.0 4.65589   Low
cufflinks 1.54502 0.0 5.17375    
cufflinks 1.1986 0.0 4.19244    
cufflinks 2.05821 0.0 9.5367    
cufflinks 1.28855 0.0 6.347    
cufflinks 5.09312 0.0 20.68   High
cufflinks 1.08069 0.0 3.97696    

0 Strain