Gene : Phvul.002G205200 P. vulgaris v2.1
Defline:  (1 of 5) PTHR31851:SF6 - VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 Genomic Order:  2029
Name:  ? Phvul.002G205200 Secondary Identifier:  ? PAC:37178409
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G205200 0.5kb upstream 0.5kb upstream 1426 true Chr02: 37188537-37189962 Phaseolus vulgaris
Phvul.002G205200 0.5kb upstream 0.5kb upstream 500 false Chr02: 37189463-37189962 Phaseolus vulgaris
Phvul.002G205200 0.5kb downstream 0.5kb downstream 1426 true Chr02: 37188037-37189462 Phaseolus vulgaris
Phvul.002G205200 0.5kb downstream 0.5kb downstream 500 false Chr02: 37188037-37188536 Phaseolus vulgaris
Phvul.002G205200 1.0kb upstream 1.0kb upstream 1926 true Chr02: 37188537-37190462 Phaseolus vulgaris
Phvul.002G205200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37189463-37190462 Phaseolus vulgaris
Phvul.002G205200 1.0kb downstream 1.0kb downstream 1926 true Chr02: 37187537-37189462 Phaseolus vulgaris
Phvul.002G205200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37187537-37188536 Phaseolus vulgaris
Phvul.002G205200 2.0kb upstream 2.0kb upstream 2926 true Chr02: 37188537-37191462 Phaseolus vulgaris
Phvul.002G205200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37189463-37191462 Phaseolus vulgaris
Phvul.002G205200 2.0kb downstream 2.0kb downstream 2926 true Chr02: 37186537-37189462 Phaseolus vulgaris
Phvul.002G205200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37186537-37188536 Phaseolus vulgaris
Phvul.002G205200 5.0kb upstream 5.0kb upstream 5926 true Chr02: 37188537-37194462 Phaseolus vulgaris
Phvul.002G205200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37189463-37194462 Phaseolus vulgaris
Phvul.002G205200 5.0kb downstream 5.0kb downstream 5926 true Chr02: 37183537-37189462 Phaseolus vulgaris
Phvul.002G205200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37183537-37188536 Phaseolus vulgaris
Phvul.002G205200 10.0kb upstream 10.0kb upstream 10926 true Chr02: 37188537-37199462 Phaseolus vulgaris
Phvul.002G205200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37189463-37199462 Phaseolus vulgaris
Phvul.002G205200 10.0kb downstream 10.0kb downstream 10926 true Chr02: 37178537-37189462 Phaseolus vulgaris
Phvul.002G205200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37178537-37188536 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310812 5265 Fabidae View MSA
124070442 5270 Rosid View MSA
123753376 5271 Pentapetalae View MSA
122797490 5272 Eudicot View MSA
122043714 5273 Angiosperm View MSA
121351711 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.181659 0.0 0.765433 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.293931 0.0 1.1995 Low  
cufflinks 0.0630784 0.0 0.296188 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.8431 0.0 40.8316   High
cufflinks 4.21262 0.0 13.2305    
cufflinks 33.0475 0.0 86.1437 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0368354 0.0 0.182742 Low Low

0 Strain