Gene : Phvul.002G205600 P. vulgaris v2.1
Defline:  (1 of 1) K15430 - tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214] (TRM11, TRMT11) Genomic Order:  2033
Name:  ? Phvul.002G205600 Secondary Identifier:  ? PAC:37177453
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6829 Phaseolus vulgaris pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G205600 0.5kb upstream 0.5kb upstream 3991 true Chr02: 37213817-37217807 Phaseolus vulgaris
Phvul.002G205600 0.5kb upstream 0.5kb upstream 500 false Chr02: 37213817-37214316 Phaseolus vulgaris
Phvul.002G205600 0.5kb downstream 0.5kb downstream 3991 true Chr02: 37214317-37218307 Phaseolus vulgaris
Phvul.002G205600 0.5kb downstream 0.5kb downstream 500 false Chr02: 37217808-37218307 Phaseolus vulgaris
Phvul.002G205600 1.0kb upstream 1.0kb upstream 4491 true Chr02: 37213317-37217807 Phaseolus vulgaris
Phvul.002G205600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37213317-37214316 Phaseolus vulgaris
Phvul.002G205600 1.0kb downstream 1.0kb downstream 4491 true Chr02: 37214317-37218807 Phaseolus vulgaris
Phvul.002G205600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37217808-37218807 Phaseolus vulgaris
Phvul.002G205600 2.0kb upstream 2.0kb upstream 5491 true Chr02: 37212317-37217807 Phaseolus vulgaris
Phvul.002G205600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37212317-37214316 Phaseolus vulgaris
Phvul.002G205600 2.0kb downstream 2.0kb downstream 5491 true Chr02: 37214317-37219807 Phaseolus vulgaris
Phvul.002G205600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37217808-37219807 Phaseolus vulgaris
Phvul.002G205600 5.0kb upstream 5.0kb upstream 8491 true Chr02: 37209317-37217807 Phaseolus vulgaris
Phvul.002G205600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37209317-37214316 Phaseolus vulgaris
Phvul.002G205600 5.0kb downstream 5.0kb downstream 8491 true Chr02: 37214317-37222807 Phaseolus vulgaris
Phvul.002G205600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37217808-37222807 Phaseolus vulgaris
Phvul.002G205600 10.0kb upstream 10.0kb upstream 13491 true Chr02: 37204317-37217807 Phaseolus vulgaris
Phvul.002G205600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37204317-37214316 Phaseolus vulgaris
Phvul.002G205600 10.0kb downstream 10.0kb downstream 13491 true Chr02: 37214317-37227807 Phaseolus vulgaris
Phvul.002G205600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37217808-37227807 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304995 5265 Fabidae View MSA
124065317 5270 Rosid View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.94797 0.0 16.6609    
cufflinks 11.7616 0.0 31.2145   High
cufflinks 2.37751 0.0 7.36964   Low
cufflinks 7.26459 0.0 20.1568    
cufflinks 5.28124 0.0 15.0524    
cufflinks 3.38231 0.0 10.0702   Low
cufflinks 5.02588 0.0 14.3264    
cufflinks 7.08931 0.0 19.5371    
cufflinks 4.93974 0.0 14.1664    
cufflinks 6.10399 0.0 17.1352    
cufflinks 5.74015 0.0 16.2346    

0 Strain