Gene : Phvul.002G207500 P. vulgaris v2.1
Defline:  (1 of 2) K08917 - light-harvesting complex II chlorophyll a/b binding protein 6 (LHCB6) Genomic Order:  2052
Name:  ? Phvul.002G207500 Secondary Identifier:  ? PAC:37175234
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G207500 0.5kb upstream 0.5kb upstream 1921 true Chr02: 37421897-37423817 Phaseolus vulgaris
Phvul.002G207500 0.5kb upstream 0.5kb upstream 500 false Chr02: 37421897-37422396 Phaseolus vulgaris
Phvul.002G207500 0.5kb downstream 0.5kb downstream 1921 true Chr02: 37422397-37424317 Phaseolus vulgaris
Phvul.002G207500 0.5kb downstream 0.5kb downstream 500 false Chr02: 37423818-37424317 Phaseolus vulgaris
Phvul.002G207500 1.0kb upstream 1.0kb upstream 2421 true Chr02: 37421397-37423817 Phaseolus vulgaris
Phvul.002G207500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 37421397-37422396 Phaseolus vulgaris
Phvul.002G207500 1.0kb downstream 1.0kb downstream 2421 true Chr02: 37422397-37424817 Phaseolus vulgaris
Phvul.002G207500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 37423818-37424817 Phaseolus vulgaris
Phvul.002G207500 2.0kb upstream 2.0kb upstream 3421 true Chr02: 37420397-37423817 Phaseolus vulgaris
Phvul.002G207500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 37420397-37422396 Phaseolus vulgaris
Phvul.002G207500 2.0kb downstream 2.0kb downstream 3421 true Chr02: 37422397-37425817 Phaseolus vulgaris
Phvul.002G207500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 37423818-37425817 Phaseolus vulgaris
Phvul.002G207500 5.0kb upstream 5.0kb upstream 6421 true Chr02: 37417397-37423817 Phaseolus vulgaris
Phvul.002G207500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 37417397-37422396 Phaseolus vulgaris
Phvul.002G207500 5.0kb downstream 5.0kb downstream 6421 true Chr02: 37422397-37428817 Phaseolus vulgaris
Phvul.002G207500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 37423818-37428817 Phaseolus vulgaris
Phvul.002G207500 10.0kb upstream 10.0kb upstream 11421 true Chr02: 37412397-37423817 Phaseolus vulgaris
Phvul.002G207500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 37412397-37422396 Phaseolus vulgaris
Phvul.002G207500 10.0kb downstream 10.0kb downstream 11421 true Chr02: 37422397-37433817 Phaseolus vulgaris
Phvul.002G207500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 37423818-37433817 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311763 5265 Fabidae View MSA
124068665 5270 Rosid View MSA
123745282 5271 Pentapetalae View MSA
122788201 5272 Eudicot View MSA
122042531 5273 Angiosperm View MSA
121350849 5274 Embryophyte View MSA
123381903 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 100.581 0.0 310.334 High  
cufflinks 289.445 0.0 908.789 High  
cufflinks 1724.74 0.0 8097.54 High High
cufflinks 145.042 0.0 477.272 High  
cufflinks 259.597 0.0 785.179 High  
cufflinks 422.189 0.0 1505.92 High  
cufflinks 0.220419 0.0 1.0557 Low Low
cufflinks 0.0232706 0.0 0.267578 Low Low
cufflinks 0.276479 0.0 1.21608 Low Low
cufflinks 128.022 0.0 410.213 High  
cufflinks 139.682 0.0 454.081 High  

0 Strain