Gene : Phvul.002G190100 P. vulgaris v2.1
Defline:  (1 of 2) K02901 - large subunit ribosomal protein L27e (RP-L27e, RPL27) Genomic Order:  1880
Name:  ? Phvul.002G190100 Secondary Identifier:  ? PAC:37177303
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G190100 0.5kb upstream 0.5kb upstream 1860 true Chr02: 35369153-35371012 Phaseolus vulgaris
Phvul.002G190100 0.5kb upstream 0.5kb upstream 500 false Chr02: 35369153-35369652 Phaseolus vulgaris
Phvul.002G190100 0.5kb downstream 0.5kb downstream 1860 true Chr02: 35369653-35371512 Phaseolus vulgaris
Phvul.002G190100 0.5kb downstream 0.5kb downstream 500 false Chr02: 35371013-35371512 Phaseolus vulgaris
Phvul.002G190100 1.0kb upstream 1.0kb upstream 2360 true Chr02: 35368653-35371012 Phaseolus vulgaris
Phvul.002G190100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35368653-35369652 Phaseolus vulgaris
Phvul.002G190100 1.0kb downstream 1.0kb downstream 2360 true Chr02: 35369653-35372012 Phaseolus vulgaris
Phvul.002G190100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35371013-35372012 Phaseolus vulgaris
Phvul.002G190100 2.0kb upstream 2.0kb upstream 3360 true Chr02: 35367653-35371012 Phaseolus vulgaris
Phvul.002G190100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35367653-35369652 Phaseolus vulgaris
Phvul.002G190100 2.0kb downstream 2.0kb downstream 3360 true Chr02: 35369653-35373012 Phaseolus vulgaris
Phvul.002G190100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35371013-35373012 Phaseolus vulgaris
Phvul.002G190100 5.0kb upstream 5.0kb upstream 6360 true Chr02: 35364653-35371012 Phaseolus vulgaris
Phvul.002G190100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35364653-35369652 Phaseolus vulgaris
Phvul.002G190100 5.0kb downstream 5.0kb downstream 6360 true Chr02: 35369653-35376012 Phaseolus vulgaris
Phvul.002G190100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35371013-35376012 Phaseolus vulgaris
Phvul.002G190100 10.0kb upstream 10.0kb upstream 11360 true Chr02: 35359653-35371012 Phaseolus vulgaris
Phvul.002G190100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35359653-35369652 Phaseolus vulgaris
Phvul.002G190100 10.0kb downstream 10.0kb downstream 11360 true Chr02: 35369653-35381012 Phaseolus vulgaris
Phvul.002G190100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35371013-35381012 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299688 5265 Fabidae View MSA
124065262 5270 Rosid View MSA
123741736 5271 Pentapetalae View MSA
122786015 5272 Eudicot View MSA
122045020 5273 Angiosperm View MSA
121345737 5274 Embryophyte View MSA
123427909 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.3894 0.0 191.632 High  
cufflinks 111.572 0.0 306.456 High High
cufflinks 42.8419 0.0 110.876 High Low
cufflinks 131.278 0.0 365.764 High High
cufflinks 96.0313 0.0 258.866 High  
cufflinks 37.2397 0.0 96.2731 High Low
cufflinks 58.6598 0.0 153.781 High  
cufflinks 66.8599 0.0 176.543 High  
cufflinks 75.7853 0.0 201.813 High  
cufflinks 38.4975 0.0 99.5524 High Low
cufflinks 91.0105 0.0 245.55 High  

0 Strain