Gene : Phvul.002G190500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31065:SF14 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  1884
Name:  ? Phvul.002G190500 Secondary Identifier:  ? PAC:37178234
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G190500 0.5kb upstream 0.5kb upstream 3548 true Chr02: 35399466-35403013 Phaseolus vulgaris
Phvul.002G190500 0.5kb upstream 0.5kb upstream 500 false Chr02: 35399466-35399965 Phaseolus vulgaris
Phvul.002G190500 0.5kb downstream 0.5kb downstream 3548 true Chr02: 35399966-35403513 Phaseolus vulgaris
Phvul.002G190500 0.5kb downstream 0.5kb downstream 500 false Chr02: 35403014-35403513 Phaseolus vulgaris
Phvul.002G190500 1.0kb upstream 1.0kb upstream 4048 true Chr02: 35398966-35403013 Phaseolus vulgaris
Phvul.002G190500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35398966-35399965 Phaseolus vulgaris
Phvul.002G190500 1.0kb downstream 1.0kb downstream 4048 true Chr02: 35399966-35404013 Phaseolus vulgaris
Phvul.002G190500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35403014-35404013 Phaseolus vulgaris
Phvul.002G190500 2.0kb upstream 2.0kb upstream 5048 true Chr02: 35397966-35403013 Phaseolus vulgaris
Phvul.002G190500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35397966-35399965 Phaseolus vulgaris
Phvul.002G190500 2.0kb downstream 2.0kb downstream 5048 true Chr02: 35399966-35405013 Phaseolus vulgaris
Phvul.002G190500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35403014-35405013 Phaseolus vulgaris
Phvul.002G190500 5.0kb upstream 5.0kb upstream 8048 true Chr02: 35394966-35403013 Phaseolus vulgaris
Phvul.002G190500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35394966-35399965 Phaseolus vulgaris
Phvul.002G190500 5.0kb downstream 5.0kb downstream 8048 true Chr02: 35399966-35408013 Phaseolus vulgaris
Phvul.002G190500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35403014-35408013 Phaseolus vulgaris
Phvul.002G190500 10.0kb upstream 10.0kb upstream 13048 true Chr02: 35389966-35403013 Phaseolus vulgaris
Phvul.002G190500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35389966-35399965 Phaseolus vulgaris
Phvul.002G190500 10.0kb downstream 10.0kb downstream 13048 true Chr02: 35399966-35413013 Phaseolus vulgaris
Phvul.002G190500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35403014-35413013 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298837 5265 Fabidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.291135 0.0 1.21478 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.358013 0.0 1.47342 Low  
cufflinks 0.0665443 0.0 0.320844 Low Low
cufflinks 0.0582363 0.0 0.285213 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.247984 0.0 1.0486 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.639054 0.0 2.51035   High

0 Strain