Gene : Phvul.002G193200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23074//PTHR23074:SF92 - AAA ATPASE // SUBFAMILY NOT NAMED Genomic Order:  1912
Name:  ? Phvul.002G193200 Secondary Identifier:  ? PAC:37176816
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G193200 0.5kb upstream 0.5kb upstream 15547 true Chr02: 35686577-35702123 Phaseolus vulgaris
Phvul.002G193200 0.5kb upstream 0.5kb upstream 500 false Chr02: 35701624-35702123 Phaseolus vulgaris
Phvul.002G193200 0.5kb downstream 0.5kb downstream 15547 true Chr02: 35686077-35701623 Phaseolus vulgaris
Phvul.002G193200 0.5kb downstream 0.5kb downstream 500 false Chr02: 35686077-35686576 Phaseolus vulgaris
Phvul.002G193200 1.0kb upstream 1.0kb upstream 16047 true Chr02: 35686577-35702623 Phaseolus vulgaris
Phvul.002G193200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35701624-35702623 Phaseolus vulgaris
Phvul.002G193200 1.0kb downstream 1.0kb downstream 16047 true Chr02: 35685577-35701623 Phaseolus vulgaris
Phvul.002G193200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35685577-35686576 Phaseolus vulgaris
Phvul.002G193200 2.0kb upstream 2.0kb upstream 17047 true Chr02: 35686577-35703623 Phaseolus vulgaris
Phvul.002G193200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35701624-35703623 Phaseolus vulgaris
Phvul.002G193200 2.0kb downstream 2.0kb downstream 17047 true Chr02: 35684577-35701623 Phaseolus vulgaris
Phvul.002G193200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35684577-35686576 Phaseolus vulgaris
Phvul.002G193200 5.0kb upstream 5.0kb upstream 20047 true Chr02: 35686577-35706623 Phaseolus vulgaris
Phvul.002G193200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35701624-35706623 Phaseolus vulgaris
Phvul.002G193200 5.0kb downstream 5.0kb downstream 20047 true Chr02: 35681577-35701623 Phaseolus vulgaris
Phvul.002G193200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35681577-35686576 Phaseolus vulgaris
Phvul.002G193200 10.0kb upstream 10.0kb upstream 25047 true Chr02: 35686577-35711623 Phaseolus vulgaris
Phvul.002G193200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35701624-35711623 Phaseolus vulgaris
Phvul.002G193200 10.0kb downstream 10.0kb downstream 25047 true Chr02: 35676577-35701623 Phaseolus vulgaris
Phvul.002G193200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35676577-35686576 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041197 5273 Angiosperm View MSA
122303712 5265 Fabidae View MSA
124067372 5270 Rosid View MSA
123738297 5271 Pentapetalae View MSA
122786699 5272 Eudicot View MSA
121345439 5274 Embryophyte View MSA
123427042 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0335 0.0 29.4199   Low
cufflinks 22.1273 0.0 57.244    
cufflinks 16.6197 0.0 43.3204    
cufflinks 25.4438 0.0 65.7701    
cufflinks 24.0819 0.0 62.2764    
cufflinks 19.3273 0.0 50.1216    
cufflinks 16.8285 0.0 43.7749    
cufflinks 18.518 0.0 48.0376    
cufflinks 19.2725 0.0 49.9541    
cufflinks 35.999 0.0 93.527 High High
cufflinks 28.8303 0.0 74.556   High

0 Strain