Gene : Phvul.002G191300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10799:SF725 - IMMUNOGLOBULIN E-SET DOMAIN-CONTAINING PROTEIN Genomic Order:  1892
Name:  ? Phvul.002G191300 Secondary Identifier:  ? PAC:37175302
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G191300 0.5kb upstream 0.5kb upstream 21217 true Chr02: 35483621-35504837 Phaseolus vulgaris
Phvul.002G191300 0.5kb upstream 0.5kb upstream 500 false Chr02: 35504338-35504837 Phaseolus vulgaris
Phvul.002G191300 0.5kb downstream 0.5kb downstream 21217 true Chr02: 35483121-35504337 Phaseolus vulgaris
Phvul.002G191300 0.5kb downstream 0.5kb downstream 500 false Chr02: 35483121-35483620 Phaseolus vulgaris
Phvul.002G191300 1.0kb upstream 1.0kb upstream 21717 true Chr02: 35483621-35505337 Phaseolus vulgaris
Phvul.002G191300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35504338-35505337 Phaseolus vulgaris
Phvul.002G191300 1.0kb downstream 1.0kb downstream 21717 true Chr02: 35482621-35504337 Phaseolus vulgaris
Phvul.002G191300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35482621-35483620 Phaseolus vulgaris
Phvul.002G191300 2.0kb upstream 2.0kb upstream 22717 true Chr02: 35483621-35506337 Phaseolus vulgaris
Phvul.002G191300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35504338-35506337 Phaseolus vulgaris
Phvul.002G191300 2.0kb downstream 2.0kb downstream 22717 true Chr02: 35481621-35504337 Phaseolus vulgaris
Phvul.002G191300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35481621-35483620 Phaseolus vulgaris
Phvul.002G191300 5.0kb upstream 5.0kb upstream 25717 true Chr02: 35483621-35509337 Phaseolus vulgaris
Phvul.002G191300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35504338-35509337 Phaseolus vulgaris
Phvul.002G191300 5.0kb downstream 5.0kb downstream 25717 true Chr02: 35478621-35504337 Phaseolus vulgaris
Phvul.002G191300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35478621-35483620 Phaseolus vulgaris
Phvul.002G191300 10.0kb upstream 10.0kb upstream 30717 true Chr02: 35483621-35514337 Phaseolus vulgaris
Phvul.002G191300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35504338-35514337 Phaseolus vulgaris
Phvul.002G191300 10.0kb downstream 10.0kb downstream 30717 true Chr02: 35473621-35504337 Phaseolus vulgaris
Phvul.002G191300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35473621-35483620 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299903 5265 Fabidae View MSA
124067092 5270 Rosid View MSA
123742521 5271 Pentapetalae View MSA
122789945 5272 Eudicot View MSA
122042077 5273 Angiosperm View MSA
121346690 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.68026 0.0 4.61856   Low
cufflinks 5.02786 0.0 13.0021    
cufflinks 7.07245 0.0 18.3434    
cufflinks 1.75335 0.0 4.83655   Low
cufflinks 6.27204 0.0 16.2139    
cufflinks 10.172 0.0 26.7542    
cufflinks 7.88599 0.0 20.5091    
cufflinks 8.80001 0.0 23.0312    
cufflinks 7.64153 0.0 19.84    
cufflinks 8.67828 0.0 22.6237    
cufflinks 4.80193 0.0 12.4346    

0 Strain